Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1198 |
Symbol | |
ID | 5733091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 1379470 |
End bp | 1381227 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641278338 |
Product | cell envelope-related transcriptional attenuator |
Protein accession | YP_001543974 |
Protein GI | 159897727 |
COG category | [K] Transcription |
COG ID | [COG1316] Transcriptional regulator |
TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTGCAA AAACCGATAC ACCTGAGGAA TCGACCAACG GGTCAGCCAA TGATCTATCG CTCGATGCTG AGCATGTTCG TAGTCAAGCT ACCACACCCT TGCCAACTCG TTCACGTGCC GCAGCTAAAG CCGATGCTGC CAACGACGCG GCGTTGATGA ATGATCTGTT GTTGAACAAT AATTCGACTG CTGCTGCACG CCCACGCCCA CGGGCCGTAC CACGTGCTGA CCACGAAGGA TCATATGTTC GTGTGCCCAA GGCAGTCCAA TCGGCGGTTG GCAGCCGACC AACCTCGCGC CCATTGCCAC CCAAAACAGA TCCAATCAAA CGTACCTCGC GTGGAGCTGG CTGTGGTATG GTTATGCTTG GGGTCTTGCT AACGGTGGTT TTGGTCGGTG GTGGTGGGGC ACTTTGGGCC TATTTAAAGG TTAAAAATGC CACAAGTGAT GCCTTAGTAA CCATCCCAAC CCAAGCGCCA AACCTAGTCG AAAATCCTAA TAATCCTAAT CCTCAGCCCA ATCAACCTTT GGCAACCCCC GATATTGTCA AAGATCCCTT TAATTTGTTG TTGATTGGGG TCGATTTACG TGAAAATGAT ACCAAAGCTC GCACTGATAC CATCATTGTG TTGCATATTG ATCCAACCCA AAAATGGGCC AGCATGGTTT CGATTCCGCG CGATAGTTGT GCCGAAATTC CAGGCTACGA TGCCCCAGGC ACATGTTCGC AGCGAATTAA TGCAGCCTAC GAACTGGGTT ATAAAGAAGG TATCGCCCAA AATATGACGA TTCCTTCAAC TCAGGCAATG GCATTAACCC GCGATACCGT CGCCAATATG CTGAATATTA ATATCGATTA TGTTGCTCAA GTCGATTTTA AGGGCTTTCG CAAAATTGTT GATGCCGTTG GGGGCATTAC AATCGATGTG CAACGCCCGC TATGGGATGC GACTTACCCA ACCGATGATG ACGATTATGG AGTGATTCGG CTGTTTATTC CGGCTGGCTT GCAACACATG GATGGCACAA CTGCGCTGCG TTATGCCCGT TCACGCCATC AAGATGCTGA TTATGGCCGC TCACGCCGCC AACAAGATGT GATTCGAGCG CTGGTTCAAA CCCTCAAAGA TAAAGGCTTG CTCGACCAAA TTGATGCCTT GGATAGCCTT GCTGCACAAC TCAAAGGCTC GTTCTATACC GACCTGCCAA TCGATGACCT TGGCAATTTA CGGGCTTTGG CTGGGCTTGG CAGTGATATT GCCAATGGCC GGATCAAGAG TGTCAAATGG GATACCAGCT CAGTAATCGG CTATATGGAT GAGTCGCAGT ATGTGCCAAT TTGGGACCCT GCCAGCATCG CGGCCACGGT TGATCAATTA TTGACCAGCC CAATTCCTGA TACCAATAGC CCAATTGATG GTAGCTCAAA CACACCTTCG GACGACAATC TAAGCATCGA AGTGATCAAT GGAGCGCAAA TTAGTGGTTT GGCAGGCGAT GTAGCAACTC ACCTCGAAAA CCGTGACTAT CAATTGCTCA ATCCTTCAAC CGCTTCAACC GTGTATGACA CCACCAAAAT CATCGATTTT GGCAATCATA AAGAACTGCG TGAGCAACTT GCTGCTGAAT TGGGGATTAG CAGCCGCAAC ATTATTGTGG TAAGCAAAAC CAGCCCAGCT CCCGAACAAC CAAAGGGCGA CGCAGCTTTA GTGTTGTTGC TTGGCCGCGA CTATGATGAG GCGTGGCGCA AACCCTAA
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Protein sequence | MPAKTDTPEE STNGSANDLS LDAEHVRSQA TTPLPTRSRA AAKADAANDA ALMNDLLLNN NSTAAARPRP RAVPRADHEG SYVRVPKAVQ SAVGSRPTSR PLPPKTDPIK RTSRGAGCGM VMLGVLLTVV LVGGGGALWA YLKVKNATSD ALVTIPTQAP NLVENPNNPN PQPNQPLATP DIVKDPFNLL LIGVDLREND TKARTDTIIV LHIDPTQKWA SMVSIPRDSC AEIPGYDAPG TCSQRINAAY ELGYKEGIAQ NMTIPSTQAM ALTRDTVANM LNINIDYVAQ VDFKGFRKIV DAVGGITIDV QRPLWDATYP TDDDDYGVIR LFIPAGLQHM DGTTALRYAR SRHQDADYGR SRRQQDVIRA LVQTLKDKGL LDQIDALDSL AAQLKGSFYT DLPIDDLGNL RALAGLGSDI ANGRIKSVKW DTSSVIGYMD ESQYVPIWDP ASIAATVDQL LTSPIPDTNS PIDGSSNTPS DDNLSIEVIN GAQISGLAGD VATHLENRDY QLLNPSTAST VYDTTKIIDF GNHKELREQL AAELGISSRN IIVVSKTSPA PEQPKGDAAL VLLLGRDYDE AWRKP
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