Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_1004 |
Symbol | |
ID | 5732908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 1149318 |
End bp | 1150166 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641278139 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_001543780 |
Protein GI | 159897533 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2176] DNA polymerase III, alpha subunit (gram-positive type) |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTCCCA CGTTGGGAAC TAGAAATGAA GCACGCATGT ATACTCTCCT TGATCGTCCG TTGCACACCA TTCCGTTTGT GTTGTTCGAT ATGGAAAGCA CTGGCTTAGA TGTTCAAATT GGGCATCGCA TTTGTGAAAT GGCGGCAATG CGCATTCAAG GTCGCGAGAT TATTGATCGC TGTGAGTTTT TGGTAAATCC ACAACGCGAA ATTGATCCCG CTGCGTTTGC GGTAAACGGT ATTAGTGCCG AAATGGTTGC CAATGCACCA TCATTTGGCG AAATTTGGCC TAAAGTCAAT AAATTATTTC ATGAGGCAGT TTTAGTTGCG CATAACGCCT ATTTTGATAT TGGCTTTTTG ACCAGCGAAT TAAGCCGAAT TGATTTACCA CCTCTTGAAA CACCTGTCAT CGATACATTG GCGTTGGCGC GGCGCTACAT CACTGCACGC CGCTACAATT TGACCTCGCT CGCAACCAAT TTGGGTGAAA AAGCACCTTC GCATCGTGCG ATGAGCGACG TTGTGGCCTT ACGCCCAGTT TTTGAGCACT TGCTCGATAT TTTGTATCGC AAAGGGGTGC ATACCTTGGC CGATTTGCTG CGAGCACAGC GCGGCCTGTT GCCTGGCGAC GAAGAAAGCC CTTTGATTCA AGAAATTTCG ACGGCGATGA CTAGCCGCCA ATCGTTGATG ATCTCCTATC GCACTGCTGG CGGTGATCCG GTTGAGCGGC GCGTGCTGCC GATGGGCTTG ACAGTCGAGG GTAAACGTCA CATTTTGCAC GCCTACTGCT ATTTGCGCAA TGCTCAGCGC ATGTTCGCGC TCGACCGACT ATCGATTGTC GAATTGTAA
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Protein sequence | MFPTLGTRNE ARMYTLLDRP LHTIPFVLFD MESTGLDVQI GHRICEMAAM RIQGREIIDR CEFLVNPQRE IDPAAFAVNG ISAEMVANAP SFGEIWPKVN KLFHEAVLVA HNAYFDIGFL TSELSRIDLP PLETPVIDTL ALARRYITAR RYNLTSLATN LGEKAPSHRA MSDVVALRPV FEHLLDILYR KGVHTLADLL RAQRGLLPGD EESPLIQEIS TAMTSRQSLM ISYRTAGGDP VERRVLPMGL TVEGKRHILH AYCYLRNAQR MFALDRLSIV EL
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