Gene Haur_0121 details

Gene Information

• Locus tag: Haur_0121
• ID: 5732016
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Herpetosiphon aurantiacus ATCC 23779
• Kingdom: Bacteria
• Replicon accession: NC_009972
• Strand: +
• Start bp: 154517
• End bp: 155083
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641277245
• Product: NusG antitermination factor
• Protein accession: YP_001542901
• Protein GI: 159896654
• COG category: [K] Transcription
• COG ID: [COG0250] Transcription antiterminator
• TIGRFAM ID: [TIGR00922] transcription termination/antitermination factor NusG

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.978934
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCTGACA ACGAAGAAGA AAAATCCACT ACTCCCGAAG GTGTCCATTG GTACGTAATT 
CATACCTATT CAGGCTATGA AAACAAAGTG ATGCAAAATC TCCGTCATCG GATTGAATCG 
ATGGACATGC GGAACCAAAT TTTCCGTGTG GTCGTGCCAA CCGAAGAAGA GATTGAAATC 
AAAAATGGGC AACGTCGGAC TGTTCAAAAA AAGGTGTTTC CTGGCTATGT GCTCGTTCAA 
ATGGCCATGA CCGACGATTC GTGGTATGTG GTGCGTAATA CACCAGGTGT CACCTCGTTT 
GTGGGCATGG GAACTAAGCC ATCACCATTG GCCGATGAAG AAGTACGCTT TATTCTGAAG 
CAAATGGAAG AAGAAGCACC CAAAGTTAAG GTCAACTACG AAATTGGCCA AACTGTCAAA 
ATTACCGATG GCCCCTTCAC CGACTTTGAA GGTGTGGTCG ATGAGATTGA CGAAGAACGT 
GGGCGCGTGC GCGTGCTTGT CTCGTTCTTT GGCCGTGAAG CTCCAGTTGA ACTTGATTTC 
TTACAAGTTA TTCGCGTTAT AGAATAA 

 

Protein sequence

MSDNEEEKST TPEGVHWYVI HTYSGYENKV MQNLRHRIES MDMRNQIFRV VVPTEEEIEI 
KNGQRRTVQK KVFPGYVLVQ MAMTDDSWYV VRNTPGVTSF VGMGTKPSPL ADEEVRFILK 
QMEEEAPKVK VNYEIGQTVK ITDGPFTDFE GVVDEIDEER GRVRVLVSFF GREAPVELDF 
LQVIRVIE