Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_1035 |
Symbol | |
ID | 6743850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 970080 |
End bp | 970961 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 642750843 |
Product | UspA domain protein |
Protein accession | YP_002121699 |
Protein GI | 195953409 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTATC TTGTAAGCGT TGATTTTTCA GATATCACAA ACTTGGTGGT AAGAAGTGCA AAAGTCTTTG CTACAAAACT AAATGTAGAG TTAGAGCTTC TTCATATAAT AGCTCCTTTT ACATACCTTC CATACCCAGA AGGTCTTTCT ATAGATATAG TAGACATGGA TATTATCAAA AAAGCCGAAG AAAACGCAAA AAATTTAGCT TTGGAAAAAC TAAGCGCCTT AGCAGAGTAT TTAGATCCGG TGAAAACCAC TTACAAAGTA CTAATAGATA CGCCGTTTGC TGAAATAGTA TCTCAAGAAG CCGAAAACAA CAATATGGAC GGTATATTTT TAGGTGGGCA TAGTAAGAAC CTTATAGAAA AGATATTGGT GGGAAGCACT ACTGAAGATG TTGTTAAGAA CTCTAAAGTT AGCTTGGTAG TGATAAAAGC TAAGGAAATA GAAAAACTAG ACCATATTCT TGTGGCTTAC GATTTTACCA GCATATGCGA TAAGATGCTA GATTTTATAT TTGATACTTT TAAAAGCATA AAACCAAAGA TTATACTACT ACACGTGGAT AAAGGTATAA ATATTCAAAT TTCTCCAGAG GTATCTCAAA CATTAGAGCA AAGTATAAAC GATGTAAAAC TAAAAAAACT AAACGATATA AAAAATAAAT TTTCTGAATT TTACAGCTTT TCATATGAGA TAATAAACGA TAACGATATA GCTAAAACGT TGGAAAGATT TGCCAACAAC ATAAACCCAG ATATTATATT TGTAGCTTCA AAAAGGCCTA AGCTTTTAGA AAGGATATTT GGCGGTGTAG AAACTGTAAG AATATTAAGA AACAGTACGC ATCCTTTGTA CATATTTAAA GCTGAGGGTT AA
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Protein sequence | MKYLVSVDFS DITNLVVRSA KVFATKLNVE LELLHIIAPF TYLPYPEGLS IDIVDMDIIK KAEENAKNLA LEKLSALAEY LDPVKTTYKV LIDTPFAEIV SQEAENNNMD GIFLGGHSKN LIEKILVGST TEDVVKNSKV SLVVIKAKEI EKLDHILVAY DFTSICDKML DFIFDTFKSI KPKIILLHVD KGINIQISPE VSQTLEQSIN DVKLKKLNDI KNKFSEFYSF SYEIINDNDI AKTLERFANN INPDIIFVAS KRPKLLERIF GGVETVRILR NSTHPLYIFK AEG
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