Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0997 |
Symbol | lysS |
ID | 6743809 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 932830 |
End bp | 934539 |
Gene Length | 1710 bp |
Protein Length | 569 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642750802 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_002121661 |
Protein GI | 195953371 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00135477 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAAT TTAGGAAAAA AAAGTTAGAA GAGCTTGCTA AAAGCCAAAA ACACGTCTAC AAATATGAAT TTGAAAGCCC TTACTTTATT CACGATATAA GAGAGAAATA CGAAAAAGAA CCAAGAAAAG ATAAAATTGT TGTAAAAGCC ACCATCAAAA GAGTTTCAAA AGTAGAAGAG GGTTTTGTTT TAAGAATGAC TTCAGAAAGT GGCGTTGAAA TGCTTGCATA TACAAAAGAG ACTTTCGAGC CAAACAAAGC TTACAACATA GAAGGTGTCC TATCAAGGGT AGAAGAAAAA TTGAGCCTAA TAGATGCAAA ACCCACAGAA GAAACTCCCA CCACAAGCAT AGATGATATT AAAAAAGAGC ACGATTTAGA TCCGAACTTT GAAGATATAT CGATAGCTGG AAGGCTTGTG GCCTTGAGAA GCATGGGTAA GGCCATATTT GGACATATAC AAGATTTTAC TGGGAAATTA CAGATATATA TTAAAAAAGA TATAGTAGGA GATGAGAAGT TTAAATTTGT AGAAGATTAT ATAGATGTAG GAGATATAAT AGGCATAAAA GGAAAACTGT TTAGAACGCA TACCGGAGAG CTCACCGTAG AAGTTTTTGA TATTGAGCTT TTAACAAAAG CCCTAAACAA CATGCCAGAA AAATGGCATG GAATAAAAGA TATAGAAATA AAGTATAGAC AAAGATATTT AGATTTAATA GCCAACGAAA GCTCTAGAAA GGTCTTTACT TTGAGATCAA AGATTATAAA AGCCCTTAGA GATTTCTTTG ATAAAAACAA GTTCATGGAA GTAGAAACAC CAATTCTTCA GCCAATAGCA TCAGGAGCTA CCGCAAGGCC TTTTGTTACA TATCACAACT ATTTAGAATC TGAGCTTTAC CTTAGGATAG CACCAGAGCT TTATCTAAAA AAACTAATAG TGGGCGGTAT ACCAAGGGTA TATGAGATTG GTAAAAACTT CAGAAACGAA GGCGTAGACA CTACGCACAA CCCAGAGTTT ACCATGGTAG AATTTTACGC TGCTTATTGG GATTATAAAA AACTCATCAA GTTTACCGAA GAGCTGTTTG ACTATCTCAC AGATATTACC GGTATCAAAA GCATAGAAAC TCAAAATGGT GTTATAAACT TAAAGCCTCC TTTCAGAGTA GCTAAGTTTT TTGAGCTTTT AGAAGAAAAA ACATCAAAAG ATAAAAGTTT TTTCCTACAC CATGAAGAAG AATTGAAGAA GTTTGCCAAC GAGCTTGGCA TACCAAAAGC TTATACTTTA ACAAAACCAA AGCTTATAGA AAAAGTATTT GAATATACAG TAGAAGACGA GCTTATCCAA CCTACTTTCA TCATAGATTT CCCGAAAATG CTGTCCCCAC TTGCTAAAAC CCACAGAGAT GACGATGAGT TGGTGGAACG TTTTGAGCTT TATATAAACA AAAAAGAAAT AGCAAATGCA TACTCAGAGT TAAACGACCC CGAAGACCAA GCCAAGAGGT TTTTAGAACA AAAGCTTCAA AAAGCCACCG GTGACGAAGA AGCTATGGAA ACTGATGATG ATTTTGTAGA GGCTCTTAGA TACGGTATGC CACCCACAGC CGGTGAAGGA ATAGGGATAG ATAGACTCGT AATGCTCTTT GCAAACGTAG ACTCCATAAG GGATGTGATA CTTTTCCCAG CCAACAGAAA GCTAGAATAA
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Protein sequence | MEEFRKKKLE ELAKSQKHVY KYEFESPYFI HDIREKYEKE PRKDKIVVKA TIKRVSKVEE GFVLRMTSES GVEMLAYTKE TFEPNKAYNI EGVLSRVEEK LSLIDAKPTE ETPTTSIDDI KKEHDLDPNF EDISIAGRLV ALRSMGKAIF GHIQDFTGKL QIYIKKDIVG DEKFKFVEDY IDVGDIIGIK GKLFRTHTGE LTVEVFDIEL LTKALNNMPE KWHGIKDIEI KYRQRYLDLI ANESSRKVFT LRSKIIKALR DFFDKNKFME VETPILQPIA SGATARPFVT YHNYLESELY LRIAPELYLK KLIVGGIPRV YEIGKNFRNE GVDTTHNPEF TMVEFYAAYW DYKKLIKFTE ELFDYLTDIT GIKSIETQNG VINLKPPFRV AKFFELLEEK TSKDKSFFLH HEEELKKFAN ELGIPKAYTL TKPKLIEKVF EYTVEDELIQ PTFIIDFPKM LSPLAKTHRD DDELVERFEL YINKKEIANA YSELNDPEDQ AKRFLEQKLQ KATGDEEAME TDDDFVEALR YGMPPTAGEG IGIDRLVMLF ANVDSIRDVI LFPANRKLE
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