Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0572 |
Symbol | |
ID | 6743368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | - |
Start bp | 510183 |
End bp | 513284 |
Gene Length | 3102 bp |
Protein Length | 1033 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 642750363 |
Product | acriflavin resistance protein |
Protein accession | YP_002121237 |
Protein GI | 195952947 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000015454 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAAACT ACTATATAAA AAAGCCCCAC GTAGTTTTTG CTACTCTTAT AGTGGCTCTT TTTCTTGGGA TCGTTGGATA TTTTGAGCTC CCAAGGGATT TGTTTCCACC TTCCAACAGG CCTCAGGTGG CAGTAGTGAC TATAGAACCC GGTGCTTCTT CCAAATATGT AGCCGATCAT GTTAGTTCTG TGATAGAAAG AGAGCTTTAT ACTATAGACG GAGTAAGAAG GGTGTTTTCT GCTTCTCAGG ATGGGCTTTC TGTGGTCACT GCAGAGTTTC ATTACGGTAA AAGCATAGGC CAAGCAGAAA CAGACGTGGC AAACTCCATC ACAAAGATAA GAAGCTTACT TCCTTCAGAT ATTCAAGAAC CAGCCATATA TCCCATCACC TCTTACACCC CACCGGTGGT AGTATTAGGC GTATGGCCTA AAAAGGGTGC AAACTTATCT CTTGCAGACG TAAGGTATAT AGCAGATAAC TATCTAAAAC CCTCTCTTCT TAGAACAGGT GTCGTATCAA ACGTGGATGT GTTTGGGGGT TATCAAAAAG AGATAGATGT AGAAATAGAC CCCATAAAAC TTGCCTCTTA TCATCTAAGC GTTTCAGATG TTATAGATGC TGTTAAGTTT GCCAATAAAG ATGTCCCCAT GGGTATTATA TTAAACAAAA ACTCCCAATA TGTATTTAAG CTAAAAACTG AAGCCAAGAG CTTAAATCAA ATTGAGAACA TATACATAAC ACCCAATATA GCCCTAAAAG ATATCGCCAC CGTCAAATAC GCTATCCAAG ATCCAAGATC CATGTATAGA GCCAACAGGC ATCAGGCTAT AGCCCTAGCT ATACAAAGGC CTTACGGAGG AGCTGCTCTT ACCACTATAG ATGCGGTTTA TAAGCTTTTG CCAAAATTAA GAAACGAGTT TCCAGAACTA AACATACAAG TAGCTGATTC TCAAAAAAGA CTAATAGAGT TATCAAACGA CAACATGTTT GAAGCTCTGA GAGATGCAAT TATATTTACA TCTTTGGTGA TATTTATATT CTTAGCAGAT CTTAGGATGA CTTTGATCTC AGCTATGTCA ATACCTTTTG TTTACGCTGG TACCATAGGT ATTATGTGGA TACTGGGTAT AGAGTTTAAC TTAGTTACCC TTACAGCTAT AATCCTTGCA CTTGGCATGC TTGTAGATGA TGCTATAGTT ATACTTGAAA ATATAGAAAG GCATTATGTA GAGCTTAATA AAGGCCCAAT ACAAGCGGCA ATCGATGGTA CCAAAGAGGT TATGCTTGTG GTGTTTGCCG GGACTTTGGC TACGTCTATA GTGCTTTTGC CACTTTTGTT TGTAGGAAGC TATCCTGAAC GTATATTTAG ACCTTTGGCT GGAACGCTTA TAATAGCGGT GCTTGTTTCT TATATTGTTT CTATAACGTT TATACCTATT GTTAGTATTA GGTTTTTAAA ATCTGAAGGT AAAAAACTAC CCTTTGAGAC ATTTATAAAC AACGTTGTAG AAAAAATACT AAACCCTCTT AAAAGCTTTT ATATAAGCTG GAACGCTCTT ATGATAAACA ACAAAATGGC TATGAGGGTT TTTATGATTT TGGGAGTGCT TCTTTTTGTT GTAAGTTTAA GAGATATCTT ACCTTTAGAA GGAAGAGATC TTATGCCGCC TATGGATACT GGTATTGCTC TAGCAAAAGT AACATTTTAT CCAAACACAT CTATATACAA AGTAGATGAA GAAACCGCCA AGATAGAAAA ATACATATAT AGCTTAAAAT CAGACGGCAG ATACGTTACA AAAACCACAT CCATAGCCAT AGGTACAGAA CCAGGTGTTT TTACAGTGGG TGGTGGTACG CCTTACCAAG CTTCAATGAC TATTCATTTT ATAAATCGCT TCAAAAGGAC AAAAACTTTG TGGCAACTTG AAGATGAGAT AAGAAATTTT ATACATACGC TTCCGGATGT TGAGTATGCG GATGTTTATG ATTATGGCGC TACAGCAGTT TCTTCTATAA CCGCTAACCT CGATGTAACA CTTTTTAGCC CATCTTTGAG CGCTCTAAAC GAATCGGGTA ATGAGATTAT GAAAGTACTT GCCCATACCA AAGGTCTAAA ATCCTACTCA AGATCTTGGG ATATGAACGC TTTGGAATAT GATTTTAAGA TAGATAAGCA AAAATGTGCA TTTTATCATA CTACTCCTTT TGCCGTAGCA TCGCAGGTGG CTCAAGGGCT TAGCGGTGTG GTTTCATCTG TTTTCACAAT ACCAAATCAA ACTGGATATC TCATAAGGGT TATATCCTAT CCTCAAGATA GGGACAAGCT TTTTAAGTTT AAAACTTATC CTATAAAAAC ACCAGATGGA TTTATACCAT TGGAAGCTTT TGGACATTTT GTAGTAAGTC ATCAACCCAC CGTTATCACA AGACAAGCTA TGGAATATAC CCTTGATCTT TATGGTTATA GATCTACATA TCCAATCACT CATATAATGG ATAGTTTTGA CAGAGAATTT AAGAAACTAC ACATAAAACT CCCACCAGAT GTAAAAATGG AACAAACGGG AGATATATCC ATGATGAGCG ATTCTATGGG TAGAATGGCA AAAGCCATAG GTATAGGCAT AGTGCTTCTT TATCTGGTGC TTGTGCCTGT GTTTGGTTCT TGGAGATCCC CTCTTGCTAT CATACTTGCA ATACCTCTTG GTGCAATAGG CGGTGCTTGG GCACTTCTTA TTATGGATAA ACATGGCTCA TTGCCAGCTA TTATGGGTTT TGTGCTTTTA GGAAGCATAA TAGTTAAAAA CTCAATGCTT CTTATAGATT TTATCCAAGA GCGTCAAAAA GAGGGTATGG ATTTAAAACA AGCCATATCA GAAAGTATAA GACTAAGGAC AAGGCCTGTT TTGATGACAG CCTTTGGTAC AGCAGTGGGT ATGATACCAA TAGCCTTAGA ATGGGCTATA GGACTTGAAA GACTTGCTCC TTTGGCAGCA GTGGCTATAG GTGGACTTCT TTTAGGTACG TTTTTAAGCT TGGTTTATGT ACCAACGTTT TATTATTTAC TTTCTAAAAA AGGACAAAAC AATGAAACCT AA
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Protein sequence | MINYYIKKPH VVFATLIVAL FLGIVGYFEL PRDLFPPSNR PQVAVVTIEP GASSKYVADH VSSVIERELY TIDGVRRVFS ASQDGLSVVT AEFHYGKSIG QAETDVANSI TKIRSLLPSD IQEPAIYPIT SYTPPVVVLG VWPKKGANLS LADVRYIADN YLKPSLLRTG VVSNVDVFGG YQKEIDVEID PIKLASYHLS VSDVIDAVKF ANKDVPMGII LNKNSQYVFK LKTEAKSLNQ IENIYITPNI ALKDIATVKY AIQDPRSMYR ANRHQAIALA IQRPYGGAAL TTIDAVYKLL PKLRNEFPEL NIQVADSQKR LIELSNDNMF EALRDAIIFT SLVIFIFLAD LRMTLISAMS IPFVYAGTIG IMWILGIEFN LVTLTAIILA LGMLVDDAIV ILENIERHYV ELNKGPIQAA IDGTKEVMLV VFAGTLATSI VLLPLLFVGS YPERIFRPLA GTLIIAVLVS YIVSITFIPI VSIRFLKSEG KKLPFETFIN NVVEKILNPL KSFYISWNAL MINNKMAMRV FMILGVLLFV VSLRDILPLE GRDLMPPMDT GIALAKVTFY PNTSIYKVDE ETAKIEKYIY SLKSDGRYVT KTTSIAIGTE PGVFTVGGGT PYQASMTIHF INRFKRTKTL WQLEDEIRNF IHTLPDVEYA DVYDYGATAV SSITANLDVT LFSPSLSALN ESGNEIMKVL AHTKGLKSYS RSWDMNALEY DFKIDKQKCA FYHTTPFAVA SQVAQGLSGV VSSVFTIPNQ TGYLIRVISY PQDRDKLFKF KTYPIKTPDG FIPLEAFGHF VVSHQPTVIT RQAMEYTLDL YGYRSTYPIT HIMDSFDREF KKLHIKLPPD VKMEQTGDIS MMSDSMGRMA KAIGIGIVLL YLVLVPVFGS WRSPLAIILA IPLGAIGGAW ALLIMDKHGS LPAIMGFVLL GSIIVKNSML LIDFIQERQK EGMDLKQAIS ESIRLRTRPV LMTAFGTAVG MIPIALEWAI GLERLAPLAA VAIGGLLLGT FLSLVYVPTF YYLLSKKGQN NET
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