Gene HY04AAS1_0562 details

Gene Information

• Locus tag: HY04AAS1_0562
• ID: 6743358
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Hydrogenobaculum sp. Y04AAS1
• Kingdom: Bacteria
• Replicon accession: NC_011126
• Strand: -
• Start bp: 498620
• End bp: 499162
• Gene Length: 543 bp
• Protein Length: 180 aa
• Translation table: 11
• GC content: 33%
• IMG OID: 642750353
• Product: Lytic transglycosylase catalytic
• Protein accession: YP_002121227
• Protein GI: 195952937

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGTT TTAATATAAG TATACTTTTG GCAATGTTTT TCGTTGTTTT CAGCTTTTAC 
ACTAAAAAGG TATACGCTTT TCAATATAAA TATTGCTTTG AACAGGCCGC AAATAAGTAT 
GGTGTAAATG CAAAACTCCT TTATGCCATA GCAAAGGTTG AGAGCAATTT TAATTCATAT 
GCAATAAATG TGAATGCCGA TGGTAGAAGT ATAAAAGAAT ATTATCCAAA GAATAAATAT 
CAAGCCAAAA TAGTGTTAAA TTATTTGCTT AGTCATGGCT ACAACTTTGA TGTAGGAATA 
GCTCAAATAA ATATAATAAA CATAAAAAGA TGGGGTTTGA ACCCTTACGC TCTGTTAGAT 
CCTTGTTATA ACCTTGACGT ATCTGCTAAA CTTTTGAGAG AGCTTGTGGA TAGGTACGGG 
CTTAGCTGGC AAGCCATATG GCATTACAAC GGAAGGCCTT CTTACGCTTA TAAAGTATAC 
CATGCGCTCA TATGGCTTCA AAACCATAAT AGCATATACG CTACTTCTTA TCAAAATCCA 
TAA 

 

Protein sequence

MKSFNISILL AMFFVVFSFY TKKVYAFQYK YCFEQAANKY GVNAKLLYAI AKVESNFNSY 
AINVNADGRS IKEYYPKNKY QAKIVLNYLL SHGYNFDVGI AQINIINIKR WGLNPYALLD 
PCYNLDVSAK LLRELVDRYG LSWQAIWHYN GRPSYAYKVY HALIWLQNHN SIYATSYQNP