Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HY04AAS1_0525 |
Symbol | |
ID | 6743321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Hydrogenobaculum sp. Y04AAS1 |
Kingdom | Bacteria |
Replicon accession | NC_011126 |
Strand | + |
Start bp | 462382 |
End bp | 463752 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 642750316 |
Product | FAD linked oxidase domain protein |
Protein accession | YP_002121190 |
Protein GI | 195952900 |
COG category | [C] Energy production and conversion |
COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00145948 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAA AATTAAAAAA ACTTAAAGAT GCTTTGGGCG ATAAAATTAA CGATTCTATA GTAGAAAGAA AACTCTACTC TTACGATGCT ACTGCCATTC CAATAGAACA TACTACGCCT ATAGCTGTTG CTTTTCCTAC ATCTTCAGAA GATATAGAAA TGATAGTAAA AATTTGCTAT GAAGAAGATA TACCCATGGT ACCAAGAGGG GCAGGATCAG GTTTGACAGG CGGTGCTACA CCGGTAGTAG ACGGTTCTTT GGTTATATCC CTTGAAAAAA TGAATAAATT TCATGTAGAC GTAGGCAATA CCACAGCTTA CGTGGAGCCA GGGGTTATTA CATCGGAATT ACAAGACTAC GTGGAATCTC TAGGATTATT TTATCCACCA GATCCTTCTA GCTTTAAATA TTCTACCATA GGTGGCAACA TAGCAGAAAA TGCCGGTGGT CCAAGGTGTT TGAAGTATGG GGTCACAAGG GAATATGTGC TAGGGCTAGA AATGTATATA AAAGAAGGAA AGCTGTTAAA AACTGGAAAC CCCATTATAA AAGATGTAGC AGGATATGAT CTAACGAGGC TTGTAGTTGG TTCGGAAGGA ACACTTGGTA TAGTATCAAA AGCTATATTA AAATTGATAC CAAAACCACC TTACAAATCA ACCATAATGG GGATATTCAA CAACATAGAA AATATAGGTA AATCTGTAAC CAAAATATTA ACGTCTGGTA TATTACCTTG CGCATTGGAA TTTATGGATA AAAATTCTAT ACAAGCTGTA CAAAAATTCT ATCCAGCCGG TATTCCAGAA GATGCCGAAG GAGTCTTATT AATAGAGCTT GACGGACAAA AAGAAAGTGT AGAAAAAGAA AAAATGGAGG TATCCAACAT ACTAAAGTCT TTAGGAGCAG GTGTTATACC AGCCCAAAAC CCTCAACACG AACAAAAACT TTGGAGTGCA AGAAAAAATA TAGGTCCAGC CCTTGCTAAC ATCAAATCTG GTAAGATAAA CGAGGATATA GTTTTCCCAC GGATATATCT ATCTGAAGCT CTGCAAAAAA TAAACAAAAT AGCAAAAAAA TATAACCTTA CTATAGTAAA TTTTGGACAT ATAGGAGACG GTAATCTCCA TGTAAACATA CTTTACGATA AATTAAATAA AGATGAATTA GAAAGAGCAG AAAAGGCAGT AGATGAAGTG TTTGAGTTAG CTCTTAATTA TCAGGGTTCT ATCACTGGCG AACACGGTGT TGGTCTTACT AAAAAGAAAT TTTTAGAATG GCAGTTAAAA GACGTAGGTA TTGAGCTTTT AAAAGCTATA AAACAAAGTT TTGATCCAAA AAATTTATTT AACCCAGGTA AAGTTATTTA G
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Protein sequence | MEKKLKKLKD ALGDKINDSI VERKLYSYDA TAIPIEHTTP IAVAFPTSSE DIEMIVKICY EEDIPMVPRG AGSGLTGGAT PVVDGSLVIS LEKMNKFHVD VGNTTAYVEP GVITSELQDY VESLGLFYPP DPSSFKYSTI GGNIAENAGG PRCLKYGVTR EYVLGLEMYI KEGKLLKTGN PIIKDVAGYD LTRLVVGSEG TLGIVSKAIL KLIPKPPYKS TIMGIFNNIE NIGKSVTKIL TSGILPCALE FMDKNSIQAV QKFYPAGIPE DAEGVLLIEL DGQKESVEKE KMEVSNILKS LGAGVIPAQN PQHEQKLWSA RKNIGPALAN IKSGKINEDI VFPRIYLSEA LQKINKIAKK YNLTIVNFGH IGDGNLHVNI LYDKLNKDEL ERAEKAVDEV FELALNYQGS ITGEHGVGLT KKKFLEWQLK DVGIELLKAI KQSFDPKNLF NPGKVI
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