| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0264 |
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| Symbol | rpsJ |
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| ID | 6743058 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | + |
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| Start bp | 240565 |
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| End bp | 240879 |
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| Gene Length | 315 bp |
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| Protein Length | 104 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642750057 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_002120932 |
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| Protein GI | 195952642 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000000005821 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAGCAGG ATAAAATACG TATAAAGCTT AAATCTTACG ATTATAAACT TTTGGATCAA
TCTGTCAAGC AAATAGTGGA AACAGTTAAA CGAACGGGAA GCTCCGTAAA GGGGCCGATC
CCTCTGCCCA CTTCTAGAAG GCGCTGGGTG GTCTTACGTT CACCTCATAA GTTTGATCAA
TCTAGGGAGC ATTTTGAAAT CAGAGAGTTC AAGAGGATGT TAGATATAGT AAAGATTACA
CCACAAACTA TAGAATCTCT TATGGAGATA AGTCTTCCAG CTGGTGTTGA TATTGAAGTT
AAGATGAGAG GTTGA
|
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| Protein sequence | MEQDKIRIKL KSYDYKLLDQ SVKQIVETVK RTGSSVKGPI PLPTSRRRWV VLRSPHKFDQ
SREHFEIREF KRMLDIVKIT PQTIESLMEI SLPAGVDIEV KMRG
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