Gene HS_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1780 
Symbol 
ID4241314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1998290 
End bp1999258 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content41% 
IMG OID638105373 
Productantirestriction protein 
Protein accessionYP_719985 
Protein GI113461916 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.114291 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT CAACGAACAA AAAAGATATT TATCAAGAAA TTACCGATAG AATTATCACC 
GCACTTGAAG AAGGAACCGT TCCTTGGCTA AAACCTTGGA GTCACCCTGA AGGCAACTTA
GGCATACCTT GCAATGCGGT GTCGGGACGA TGTTATCAAG GGATAAATAT TTTACTTTTA
TGGATTGCGG TAGCAGAAAA TGGCTATCAA CAATGCAAAT GGATCACCGC TCAGGCAGCC
AATAAATTAG GCGGCTATGT ACGTAGAGGC GAGAAAGCCA CTATTGTTGC CAGTTATTGC
CCGATTGAGC GTGAAAAATG CGATGGCGAA GGTAACCCGA TTTGTGATGA AGAGGGCAAT
CCTGAACTGG AAAAATTCGC CATTTTAAAA CGTTATCCTG TTTTCAACAT CGAACAATGC
GAAGGTTTGC CCAAAGCAAT GTTTGATAAG ACTCAAGAGC GTGCCGTAGA TTCTGATTTA
ACCCAATACC GGATTTATGC AGACATTCGT AAAATTATTG ATGGAATGTC GCTGACGGTG
GATATTGTAC CAAGCACTGA AGCCTTTTAT CAGCCAAAAG CCGATAAAAT TGTGATGCCT
GAAATGAAGC AATTTAGCTC AGAGCAGGAT TTTTACAGCG TATTATTGCA CGAAATGACG
CACGCCACAG GGCATACTTC ACGTTTAAAT CGAGAAGGTA TTGCCTCAGG TAAAGCGAAA
TTTGGTAACA AAGTCTATGC ATTTGAAGAG TTGATTGCTG AAATGGGCGG TGCGTTTTTA
TGTGCACATC TTGGTTTTAA TCGAGTACCA CAAAATGCCG CCTATATTCA AAGTTGGCTC
AAAATTTTGA AAGAGGATAA TCGTGCTATT CTCAAAGCCT CAGGATTTGC CCGTAAAGCC
TGTGAATATA TGCTTGAGAC GCTTGATGTT CAAACACAAT ATGAACGTTA CTATCCTGAA
GTGGCGTAA
 
Protein sequence
MKNSTNKKDI YQEITDRIIT ALEEGTVPWL KPWSHPEGNL GIPCNAVSGR CYQGINILLL 
WIAVAENGYQ QCKWITAQAA NKLGGYVRRG EKATIVASYC PIEREKCDGE GNPICDEEGN
PELEKFAILK RYPVFNIEQC EGLPKAMFDK TQERAVDSDL TQYRIYADIR KIIDGMSLTV
DIVPSTEAFY QPKADKIVMP EMKQFSSEQD FYSVLLHEMT HATGHTSRLN REGIASGKAK
FGNKVYAFEE LIAEMGGAFL CAHLGFNRVP QNAAYIQSWL KILKEDNRAI LKASGFARKA
CEYMLETLDV QTQYERYYPE VA