| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1717 |
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| Symbol | dsdX |
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| ID | 4241249 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1949246 |
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| End bp | 1950583 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 638105308 |
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| Product | permease DsdX |
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| Protein accession | YP_719922 |
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| Protein GI | 113461853 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.761378 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATACTC AACTTTACCT TGTCGCAGTT TTAATATCAG GTTTGGCACT TATTATTTTT
TCTATTTTGA AGTTAAAGCT TCATCCTTTT TTAGCATTGT TACTGTCAGG TTTTTATGTT
GGAATTTTGA TGGGAATGAA ACCATTAGAA ATGCTGGATG CTATAGAAAA CGGTATAGGC
GGAACATTGG GGTTCCTTGC TGCTGTTATA GGACTGGGAA CAATTTTAGG AAAAATGATT
GAGGTATCTG GCGGAGCTGA ACGGATTGGA TTGACACTTC AAAAAATTAG ATGGCTTTCA
CCTGATGTGA TAATGGTTTT GATCGGATTG ATTTGTGGTA TTACACTTTT TGTTGAAGTC
GGCGTGGTTT TATTGATTCC TTTAGCATTT TCGATTGCCA AACGTACTAA AGTATCATTA
TTAACTTTAG CTATTCCGTT ATGTACCGCT CTTATGGCTG TTCATTGTAT TGTTCCCCCT
CATCCTGCTG CTCTTTATGT AACCAATGCG TTAGGTGCAG ATATGGGAAA AGTCATTATT
TATGGATTAC TTATTGGGTT ATTTACATCA CTATTCGCTG GTCCCGTGTT TTTACGTATG
ATGAAACGTC AAGTTCCGTT TAAGAAAGTC CCAGAGGAAT TTTCTTCTTT AACGGTACGT
CAAGAACATG AACTTCCGTC TTTATTTGCT ACATTATTTA CAATTTTGTT ACCGATAGTA
TTAATGCTGT TTAAAACGCT TGCTGAATTG ACCATAGAAA AAAAGACTGT TTTTTATACC
GCACTTGAAG TGATTGGCAA TCCTATTACT GCTATGCTTA TTGGGGCATT TGTTGCGTAT
TATTTGCTTG GTATAAAACA TCACCAAAGT ATGGAATCCT TATTAAAAAA TACTGAAAAT
GGATTTATGG CTATTGGTAA TATTTTACTG ATTATAGGTG CCGGAGGGGC ATTTAACAGT
ATTTTAAAGG CGAGCGGATT AAGTGATGGA TTGGCTGAGA TTTTAGCAAA TTTTAATACA
CATCCTATTC TATTGGCATG GCTTGTTGCT ATTGTTTTAC ATGCCGCAGT GGGTTCTGCA
ACGGTAGCAA TGATGGGAGC AACGGCAATC GTGTCGCCAT TACTTGTTAC TTACCCTGAT
ATTAGCCCCG AAATTATTGT CCTTGCTATT GGTTCTGGTG CGATAGGATG CACTATTGTA
ACGGATTCTC TCTTTTGGTT GGTCAAGCAA TATTGTGGTG CAACCTTGAA TGACATTTTT
AAATATTATA CCGGTGCAAC TTTCATCGCT TCCGTATTAG CACTCGGGTT TACATTTTTA
TTATCAACAG TGATTTAG
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| Protein sequence | MNTQLYLVAV LISGLALIIF SILKLKLHPF LALLLSGFYV GILMGMKPLE MLDAIENGIG
GTLGFLAAVI GLGTILGKMI EVSGGAERIG LTLQKIRWLS PDVIMVLIGL ICGITLFVEV
GVVLLIPLAF SIAKRTKVSL LTLAIPLCTA LMAVHCIVPP HPAALYVTNA LGADMGKVII
YGLLIGLFTS LFAGPVFLRM MKRQVPFKKV PEEFSSLTVR QEHELPSLFA TLFTILLPIV
LMLFKTLAEL TIEKKTVFYT ALEVIGNPIT AMLIGAFVAY YLLGIKHHQS MESLLKNTEN
GFMAIGNILL IIGAGGAFNS ILKASGLSDG LAEILANFNT HPILLAWLVA IVLHAAVGSA
TVAMMGATAI VSPLLVTYPD ISPEIIVLAI GSGAIGCTIV TDSLFWLVKQ YCGATLNDIF
KYYTGATFIA SVLALGFTFL LSTVI
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