Gene HS_1669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_1669 
SymbolmltC 
ID4241196 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp1897129 
End bp1898220 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content35% 
IMG OID638105255 
Productmurein transglycosylase C 
Protein accessionYP_719874 
Protein GI113461805 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAT ATATTGTATT TGCGATTATT CCTTTTCTTT TTGCTTGTAG TAGTTCTACG 
CTAAATGATG ACTATGATGA AGCTTTTGCA AAAGATACTC AAGGACTTGA TATTTTAACC
GGGCAATTTT CTCATAATAT CGATCAAATT TGGGGAGTAA ATGAACTCCT CGTGGCAAGC
AGAAAAGACT ATGTAAAATA CACAGATAAT TTTTACACTC GCAGTCATAT CAGCTTTGAT
GAAGGTTCTA TTATGATTGA AACGTTGGGT GATAAAAGTC GTTTATATCA TTCGATTATT
CATACTTTAT TAATGGGTGC GGATGCAAAA GGAATCGATT TATTTACCTC TGGCGATGTG
CCCATCAGTT CTCGTCCATT CCTCGTCGGA TTAGTTGTTG ATCATAAAGG TAAACAAGTT
AAAAATATTG CGACGGCAAG TAATTTTGCA AATTATCTTT TACAAAATAA GTTGCAAACA
CGTTACCTCA CTAATGGGAA TCCTGTACAG TATGTTATTA TTCCAATGGT TGCAAACCAT
GTTGCAGTGC GTGCCCAACG CTATTTACCT CTAATTCGAA AAGCCGCCGG ACGTTATGGG
ATAGATGAAA GTTTAATTCT TGGTATTATG CAAACGGAAT CAAGTTTCAA TCCTTATGCA
ATTAGTTATG CTAACGCAAT AGGTTTAATG CAAGTTGTAC CTCATACTGC AGGGCGAGAT
GTATTCCGTT TAAAAGGGTT AAACGGGCAA CCGTCAAAAA AATATCTCTT TAATCCCGCT
AAAAATATTG ATACAGGTGT TGCCTATTTG ACTTTATTAC GGGATAAATA TTTAGATGGT
ATAACAAATC CAACTTCAAA ACGTTTTGCA ATGATTTCCG CTTACAATAG CGGTGCCGGA
GCAGTACTAC GAGTGTTTCA TAATGATCGA GATATAGCAA TTAACAAAAT TAATCGCTTA
TATCCGGAGC AAGTATATCG TATTCTTACT ACTATGCACC CCTCTGAGCA AGCAAGAAAT
TATTTACTCA AAGTAGATAA AGCACAAAAA AGTTATAGAG TGATTAAGAA TAGCGAATCT
GATTTGCCTT AA
 
Protein sequence
MKKYIVFAII PFLFACSSST LNDDYDEAFA KDTQGLDILT GQFSHNIDQI WGVNELLVAS 
RKDYVKYTDN FYTRSHISFD EGSIMIETLG DKSRLYHSII HTLLMGADAK GIDLFTSGDV
PISSRPFLVG LVVDHKGKQV KNIATASNFA NYLLQNKLQT RYLTNGNPVQ YVIIPMVANH
VAVRAQRYLP LIRKAAGRYG IDESLILGIM QTESSFNPYA ISYANAIGLM QVVPHTAGRD
VFRLKGLNGQ PSKKYLFNPA KNIDTGVAYL TLLRDKYLDG ITNPTSKRFA MISAYNSGAG
AVLRVFHNDR DIAINKINRL YPEQVYRILT TMHPSEQARN YLLKVDKAQK SYRVIKNSES
DLP