| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1446 |
|---|
| Symbol | fucR |
|---|
| ID | 4240962 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haemophilus somnus 129PT |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008309 |
|---|
| Strand | + |
|---|
| Start bp | 1632653 |
|---|
| End bp | 1633405 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 638105024 |
|---|
| Product | L-fucose operon activator |
|---|
| Protein accession | YP_719658 |
|---|
| Protein GI | 113461589 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.00000392431 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCAA GAGAAACATT GATTTTGCAA TTAATAAATT CATCCGGAAA AGTGAATGTA
AATGATTTAG CTAAACAATT TGACGTATCT GTGGAAACTA TTCGAAGAGA TCTAACCGAT
CTGGATAAGA GAGGGTTAAT TCATCGTGTA CATGGAGGTG CTGTCAGCCG TAAAGCGAAA
GATGTCGGGA GTTCTTTTCA AAGCCGACAA CGCTTTAATT GCGATAAAAA ACGTGCCATA
GCTGCTTCCG CCATTGAATA TATGTTTGAA GGTATTGTAC TTGGTTTGGA TGCCAGTTCA
ACCAGCTGGC ATTTTGCACA AATGATCCCC GATATTCCTT GCACAGTAGT GACCAATTCT
ATGCATAACA TTACCGCACT TGTTAATAAA CCTAATATTA AAACCATTGC AACGGGTGGC
GTTTATTCAG TGAAATATGA TGCTTTTTAT GGACCGTTAT CCGAACAATT ATTACAACGT
TTACATATTG ATATTGGGAT TTTCTCTTGC ACCGGCATTG ATAGTAGCGG TGGAGTTTTG
GAATCAAATG AGCTTAATGC CTCAATTAAA CGTAAATTAA TGGATGCTTG TGAACAGAAA
TTTCTCTTAT TAGACAGTTC TAAGTTTGAA CGTAGAAATT TGATTCGTTT AACAGATTTA
TCACAAATAG ATATTTTATT TACAGACCAA GTTCCAAATC CAACTTTGAC ATCATACTGC
CAAAAATCTG ATGTTTTAAT CACTATTGTT TAA
|
|---|
| Protein sequence | MSSRETLILQ LINSSGKVNV NDLAKQFDVS VETIRRDLTD LDKRGLIHRV HGGAVSRKAK
DVGSSFQSRQ RFNCDKKRAI AASAIEYMFE GIVLGLDASS TSWHFAQMIP DIPCTVVTNS
MHNITALVNK PNIKTIATGG VYSVKYDAFY GPLSEQLLQR LHIDIGIFSC TGIDSSGGVL
ESNELNASIK RKLMDACEQK FLLLDSSKFE RRNLIRLTDL SQIDILFTDQ VPNPTLTSYC
QKSDVLITIV
|
|---|
| |