| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HS_1247 |
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| Symbol | |
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| ID | 4240758 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haemophilus somnus 129PT |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008309 |
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| Strand | + |
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| Start bp | 1428263 |
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| End bp | 1430725 |
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| Gene Length | 2463 bp |
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| Protein Length | 820 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 638104820 |
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| Product | autotransporter protein YapE |
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| Protein accession | YP_719459 |
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| Protein GI | 113461390 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3468] Type V secretory pathway, adhesin AidA |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAATAG CGGTACTTCT ACAGTTACCG TGCAAAATGC CAACATTAAA GAAAGGCGGT
CAAATTACCG GTCTTTATGT CGGGACAAAC ACAGATGCAG ATACTAGCTA TACCTCAACC
GGTTTAACTA AAATCCTTGC ACAAGACATT AGCACGAGCA AAACTGCCAG CGACTACATT
ATGGGGGTTT ATGTATTTGG TCCAAAATCC AAAGTCATCT TAAATGATTC AGAGATTAAA
GTGGTTTCTA AAGGGCAAAA TTCCTTTACG CTAAAAATTG GCAACTTTGA AAATAACGGT
AAAAGCTATA AAGGCGAAAT TATCTCGACC GGTAAAATGC AATTAGACAG CACCGAAGCA
ACTAATGCAC CGACTATTTT ATTAGTCGCT GACGATTCTA AATTAGATGC CTCGGCAGAT
ACTGCCAGTG CGGAAATTAA ATCGGCAAAC AGTGCCGTTG TATTTGGAGT TACAGATTTG
GTGTATAAAA ATGCACTTGG AGGCATTGGA GGTAATTTAA GTCGCAATAA ATCCGCTAAA
GATCAATCTG TTAAATTAAA TAATGCAGTG ATTTCAACGA CATCAGAAAA TGCCAGTTTG
ATTAAAGCAG CCAGTGCATT AAATGTAGAT TCTTTAGCCA ATAGCAAAGC AGGACTTGGT
TGGAGTAACG GCACTTTCAC CACCAAAGGC GACTTTACCC TTTCTGGCGA AAAATCTCTG
GCAACAGCAG CCAAAAACGG TTGGTTGTTT GAAGTTGATG ACGGCTCGGA ATTGACCGCA
CTTATCAATA AAAAAGCGAA AGTTGTCGGT CTTTCCAGCA AAAATACCTC AGGTACGCTG
AATATCACTC TTGATGATGC GACTTGGGAG CTGCAAGCAA AAGAAAATGG TGTACCTACA
AGTACATTGA ATAAATTAAC CCTAAACTCT CATGCTATCT TAGATGCAAG TAAGCCAACA
GATACTGCCA GCACTAAAGC ACAATATGAC ATCCAACTCA CCTCAGACGC TACTAAAGAA
GACGGCACAT TAAATAACGG CGGTATCATT ACCCTAGCCA ACAACAGCTT CAACGATATT
TTAACTATCA AAGGAAATTA CGAAGGCAAA AATGGTGTTT TGAAAGTAAA TACTGAATGG
AATTCACCGG GCGATGATAA CGGAGCAAAT GCCGCCAGTG ACTTATTGGT TATCAAAGGA
AATGCGTCCG GTAACACAAC AGTAAAAGCC ATTAAAGCTG ACGGTACTGA AGATGTGATT
GACGGTAACA TTGGTAGTAT TGCCGAAGAT TTAAACAAAA ATAGTGCGGT TCTGATTAGG
GTTCATGGAA CAGATAACGG TAATGATGTA GCCGACACAG CCGAAGGGGG TTACAAATAC
CGTAGCACCT TTACCGGTGA AGCTAGAACC ACAGGGGCAG GGGTGTTAAA ACTCGCTTCC
CGTAAAAACA ATAACGGTCA TACCGAGTAC TTTTGGACAT TAACATCGAT TAACACAAAC
AATATCAACC TTGATCCAGT TGTTCCAGCG TATGTGCTTG CACCCAAAGC TGGTTTGGAA
TTGGGTTATA CCACATTGTC AACCCTTCAC GAACGCCGTG GCGAAAACCA AACTTCAAAG
GCTCAAAATC AAACATGGGG ACGAATTTTC GGCAAACATT CAGAGCTGAA CGGCAAAACC
CGTTTAGGCA CACAACACAA TATCTATGGT TTTCAATTTG GGCATGATTT TGCGATTCAA
CATACAGAAG AGGGCGATCT TCGCTTAACT GGTGGTTATG TGAGCTATGG CATAATGAAT
TCTACTTACA GTGACCGTCT TGATGATCAA CCCCAAACTG GTAAAGGCAA ACAAAAAGGC
TGGAACTTAG GTTTAACGCA TACTCGTTAT GCCCCGAGCG GAGCATATGT TGATTTAGTG
GGTCAAATCG GTTTTTTAAA TAACCAATTC AATGCCCGTA ATGGTGTAGA AGTAAAACAA
AAAGCTACCG CTCTTGCATT GTCAGCGGAA ATCGGACTCC CTTATGCCCT GCGTGAATAC
CCAACCAAAG ATGTGTGGTT AATCGAGCCG CAAGCCCAGT TGGTGTATCA AATGTTAAAA
CTTAACAGCT TTAAAGATGA TGTCAAATAC ATTCAAGGCG GTTACCATCA CGGTTTGCGT
GGTCGTTTAG GTGTGCGTGC GGTTTATAAC GTTCAGTCGG TGGAAGGTAA ATACCGCCCG
AACAGCGTTT ATATAACTGC CAACGTACTG CATGACTTCA TGAATGGAAA AGGTGTCACC
ATCGGTCAAG ATAAAGTAAA AGAAACCTTG GCTAAAACTT GGGCAGAAGT CGGTGTAGGC
GGACAGTTAC CAGTAGGCAA ACAAAGCCTT GTGTACGCTG ATGTCCGTTA CGAACACAGC
CTAAGCGGTA CAAAGCATGA AGGATATCGT GGCACAGTAG GCTTTAAATA TACTTGGAAA
TAA
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| Protein sequence | MPIAVLLQLP CKMPTLKKGG QITGLYVGTN TDADTSYTST GLTKILAQDI STSKTASDYI
MGVYVFGPKS KVILNDSEIK VVSKGQNSFT LKIGNFENNG KSYKGEIIST GKMQLDSTEA
TNAPTILLVA DDSKLDASAD TASAEIKSAN SAVVFGVTDL VYKNALGGIG GNLSRNKSAK
DQSVKLNNAV ISTTSENASL IKAASALNVD SLANSKAGLG WSNGTFTTKG DFTLSGEKSL
ATAAKNGWLF EVDDGSELTA LINKKAKVVG LSSKNTSGTL NITLDDATWE LQAKENGVPT
STLNKLTLNS HAILDASKPT DTASTKAQYD IQLTSDATKE DGTLNNGGII TLANNSFNDI
LTIKGNYEGK NGVLKVNTEW NSPGDDNGAN AASDLLVIKG NASGNTTVKA IKADGTEDVI
DGNIGSIAED LNKNSAVLIR VHGTDNGNDV ADTAEGGYKY RSTFTGEART TGAGVLKLAS
RKNNNGHTEY FWTLTSINTN NINLDPVVPA YVLAPKAGLE LGYTTLSTLH ERRGENQTSK
AQNQTWGRIF GKHSELNGKT RLGTQHNIYG FQFGHDFAIQ HTEEGDLRLT GGYVSYGIMN
STYSDRLDDQ PQTGKGKQKG WNLGLTHTRY APSGAYVDLV GQIGFLNNQF NARNGVEVKQ
KATALALSAE IGLPYALREY PTKDVWLIEP QAQLVYQMLK LNSFKDDVKY IQGGYHHGLR
GRLGVRAVYN VQSVEGKYRP NSVYITANVL HDFMNGKGVT IGQDKVKETL AKTWAEVGVG
GQLPVGKQSL VYADVRYEHS LSGTKHEGYR GTVGFKYTWK
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