Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0153 |
Symbol | |
ID | 4239663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | - |
Start bp | 138109 |
End bp | 138654 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 638103684 |
Product | TPR repeat-containing protein |
Protein accession | YP_718359 |
Protein GI | 113460299 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCTAA AAAAATCCAT ACTTATCGCT CTACTCTCTT TCGGTATTGT CCAATCTACA CTTGCCGAAA CAGATACCGA AAGATTTAAT CGTGCTTTAC AATTTATTAA ACAACAAAAT TATTCTGACG CTTTTCCCTT ATTCAAACAA CTGGCTGAAC AGGGAGATGC AAATGCACAA CACAATCTCG GTTTGATGTA CGAATACGGA GATGGCATTA CTCAAAACGA TCAACAAGCC GTCTATTGGT ACACGAAAGC TGCTGAGCAG GGATATGCAA ATGCACAAAA CAATCTCGGT CTGATGTATA CAGATGGGGG AAAGGGCATT ACTCAAAACT ATAAACAAGC TGTCTATTGG TACACAAAAG CTGCTGAACA GGGATATGCA AATGCACAAT ACAATCTCGG CGTGATGTAT GCAAACGGAC AGGGTGTACA AAGAAATGTT TCTAAAGCTA AACAATATTA TAGATTAGCG TGCGATAATG GCTTAAACAT TGGCTGTCAA ACGTATGCAA AACTAGATAA GAAGGGTATA AAATAG
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Protein sequence | MNLKKSILIA LLSFGIVQST LAETDTERFN RALQFIKQQN YSDAFPLFKQ LAEQGDANAQ HNLGLMYEYG DGITQNDQQA VYWYTKAAEQ GYANAQNNLG LMYTDGGKGI TQNYKQAVYW YTKAAEQGYA NAQYNLGVMY ANGQGVQRNV SKAKQYYRLA CDNGLNIGCQ TYAKLDKKGI K
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