Gene HS_0153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHS_0153 
Symbol 
ID4239663 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaemophilus somnus 129PT 
KingdomBacteria 
Replicon accessionNC_008309 
Strand
Start bp138109 
End bp138654 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content38% 
IMG OID638103684 
ProductTPR repeat-containing protein 
Protein accessionYP_718359 
Protein GI113460299 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCTAA AAAAATCCAT ACTTATCGCT CTACTCTCTT TCGGTATTGT CCAATCTACA 
CTTGCCGAAA CAGATACCGA AAGATTTAAT CGTGCTTTAC AATTTATTAA ACAACAAAAT
TATTCTGACG CTTTTCCCTT ATTCAAACAA CTGGCTGAAC AGGGAGATGC AAATGCACAA
CACAATCTCG GTTTGATGTA CGAATACGGA GATGGCATTA CTCAAAACGA TCAACAAGCC
GTCTATTGGT ACACGAAAGC TGCTGAGCAG GGATATGCAA ATGCACAAAA CAATCTCGGT
CTGATGTATA CAGATGGGGG AAAGGGCATT ACTCAAAACT ATAAACAAGC TGTCTATTGG
TACACAAAAG CTGCTGAACA GGGATATGCA AATGCACAAT ACAATCTCGG CGTGATGTAT
GCAAACGGAC AGGGTGTACA AAGAAATGTT TCTAAAGCTA AACAATATTA TAGATTAGCG
TGCGATAATG GCTTAAACAT TGGCTGTCAA ACGTATGCAA AACTAGATAA GAAGGGTATA
AAATAG
 
Protein sequence
MNLKKSILIA LLSFGIVQST LAETDTERFN RALQFIKQQN YSDAFPLFKQ LAEQGDANAQ 
HNLGLMYEYG DGITQNDQQA VYWYTKAAEQ GYANAQNNLG LMYTDGGKGI TQNYKQAVYW
YTKAAEQGYA NAQYNLGVMY ANGQGVQRNV SKAKQYYRLA CDNGLNIGCQ TYAKLDKKGI
K