Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HS_0069 |
Symbol | irp |
ID | 4239577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haemophilus somnus 129PT |
Kingdom | Bacteria |
Replicon accession | NC_008309 |
Strand | + |
Start bp | 68283 |
End bp | 70889 |
Gene Length | 2607 bp |
Protein Length | 868 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 638103600 |
Product | iron-regulated outer membrane protein |
Protein accession | YP_718275 |
Protein GI | 113460218 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.024885 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTAT ATAAATTTAG AAAAGAATTA TTTGTATTGA CTTTTTTAGT CTCCGGCAGC AGTATCTCAG CAGAGATCAT TGCGGAATTA GATGAAGTTG TCGTATCCGA TAGTAGCAGT GTAGCTGATT TTCAATCACT CGCTTTTCAA GGTGGTCGTA AAGCTAGTGA TGTATTTATT GAGGGTAAAG AGTTTAAAAC ACGTTCTGCC ACCTTGGGTA ATGCTTTAGC TGGAGAATTG GGCGTGCATT CTAACCCCTT TGGAGGCGGA GCAAGTGCTC CTGTGATTAG AGGGCAAGAA GGGGTGCGTA TTAAGCTTTT GCAAAATGGG TCGGATATTG TCGATATGTC TAATATTTCG CCTGACCATG CTGTAGTCGC TGATACACTT TTAGCACAGC AGGTCGAATT GGTGCGAGGG ACATCTACCT TAATGTATGG TATGGCATCA CCTGCTGGTG TAGTGAATAT TGTCGATAAC CGTATTCCGA CTTCTCGTCC TGAGAAAGGG TATGAGGGAG AGATCGTTTC ACGTTTTGAT ACAGCGAGTA AAGAAAAAGT CTTGACCGCA GGGGTTACCT TAGCAGCAGG CGATAATTTC CTGATTCGTG CTGAGGGGCT GACACGCAAA TCAGAGAATT ACCATGTGCC AGAGGTATTT ATTGGTCAAA AATTAAACTA CCTACCGGAT AGTCATCATA AATCAAAAGT AGGAACGCTA GGCACAACTT GGATAGGCGA TAAAGGCTAT TTAGGTGCCT CCGTAAGTTA TCGTAAAGAC CGTTACGGTA TTCCTGGGCA TAATCATGCG TTTGATTATT GTTCAGGGCA TTTGTTTGAT ACAGATAATT TGAAAGCCAT TACAGGGGGG GATGGTGAGG CACCTTATCT TAATGCTTAC CCACATTTGA TGACAGATGC TGATATGATT TCTTCTCTAC ATTTCCATTG TGGTGCTGAT ATCCAAGGGC ATAAGCATAG CCATGAAAGT ATTTATGGAC ATGATCATGA TATTAGTGAA GCAGGTCCTG TCGTGGATAT GCGTTCTAAG CGTTATGATG TAAGAGGAGA GTGGAAAGCG CCTCTTCCGT GGATTAGTAA AGTAAAACTC TCGCTTGCTT ATGCAGACTA TTATCACGAT GAAAAGCATG ATGGCAAGGC ACATATTGAT AAGAATGACT CGCAGGGCAT AAAAGATAGA AAGAAATATA CGGCTGCCAT TATGTCAGGA AAACCAGAAG CTTTTTATGC TAATCGTGGA TTTAATAGCC GTTTAGAGAT TTATCATCAA CCTACAGAGC ATTTTAATGG TGTAGTAGGG ATGCAGTATC AAACACAAAA AACTAAAGTT CAGCGTTTAG CGCCTAGTTT AAATAATAAT GGACAAGATT TAAGTGGTGA GAGAAAAGAG TCTGAACGTA ATCCATTGGT ACCGCACACG AATAAGCAAT TCAGTGTATT TGCATTAGAG CAATTTACTT GGCGTAATTT TATTGTTGAA GTGGGGGCAA GATGGGAGAC ACAACGCATT CCAATCAAAT ATGATCCGAA TAAATTACGT CTTGATAAAG CTGCAGGTTC TAAAGTTCGT CTACCAGATT TATCTCCTTA TACTGAAAAT GCTTTGTCAT ATTCAGGTAC TCTAATGTGG GATTTTCATC CAGCTTATCG ACTGTCTATC ACTGGCTCGC ATAATGAAAG AATTCCATCA CCAATGGAGC TGTATTATCA TGGTAAACAT CTTGCAACAA ATTCCTTTCA ATATGGCAAT AAGGATTTAA AGAAAGAGCG GTCAAATAAT GTAGAAATCG GTCTGATGCG TATTTCCGAC AAATGGGATT TTAAAGTCAG TGCTTATTAC CAACGCTTTA AGAATTATAT CCACAATGAG AATTTGTATC GCGAGGGCAA CTTATTTATG CGTCGCTATA ACCAATCTCA GGCAAGGTTC TATGGTTTTG AGGGCGAAAT CGGTTATCAG ATAACGCCTA ATCATAAAAT TACGTTCTTT GGCGATTATG TTAATGGTAA ACTCTTTGGC TTTAAAAAAT TCTATGGTAA TCCGAAGTTT AAAAAGATAT GTGAAATTCC CAAGGCACAA CTGATAGATA TTGAACGATG TATTGAGGAT GAAGAATGGG GGGAGGAATG GGACTATCGT AAAATTGGAG AGCAAATTAT CGAACGTCCC AACCGCAATG CAGCCCGTGT TCCCCCTATG CGCTTGGGAT TTCGCCTAAA GAGCCAGTTT AACGATAATT GGTCCAGTTC ATTGGAATAT ACGAGAATGT TTGCACAAAA ACGCATATCC ATTAATACCG TGATCAAAGA GATTGATCGT GAGGAAGCAG AGAAGCGAAG AGAAAATGCG AATGGGCTTG GGTATGACGG TCATTATACA GAACTTGTCC CTGAAGATGT TACCCAAGGC TATCACTTAC TGAATCTTTC TCTCAATTAT TCACGTAAAA TAGATGGAGT AGAATATAGT GCGACATTAA GTGCGAATAA TTTGTTGAAT CAAAAAATCT ATATTCATAA CTCCTATTTG CCTTATGTAC CGCAAATGGG CAGAAATTTT ATTTTGAATG TCGGGGTAAC ATTCTAG
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Protein sequence | MKLYKFRKEL FVLTFLVSGS SISAEIIAEL DEVVVSDSSS VADFQSLAFQ GGRKASDVFI EGKEFKTRSA TLGNALAGEL GVHSNPFGGG ASAPVIRGQE GVRIKLLQNG SDIVDMSNIS PDHAVVADTL LAQQVELVRG TSTLMYGMAS PAGVVNIVDN RIPTSRPEKG YEGEIVSRFD TASKEKVLTA GVTLAAGDNF LIRAEGLTRK SENYHVPEVF IGQKLNYLPD SHHKSKVGTL GTTWIGDKGY LGASVSYRKD RYGIPGHNHA FDYCSGHLFD TDNLKAITGG DGEAPYLNAY PHLMTDADMI SSLHFHCGAD IQGHKHSHES IYGHDHDISE AGPVVDMRSK RYDVRGEWKA PLPWISKVKL SLAYADYYHD EKHDGKAHID KNDSQGIKDR KKYTAAIMSG KPEAFYANRG FNSRLEIYHQ PTEHFNGVVG MQYQTQKTKV QRLAPSLNNN GQDLSGERKE SERNPLVPHT NKQFSVFALE QFTWRNFIVE VGARWETQRI PIKYDPNKLR LDKAAGSKVR LPDLSPYTEN ALSYSGTLMW DFHPAYRLSI TGSHNERIPS PMELYYHGKH LATNSFQYGN KDLKKERSNN VEIGLMRISD KWDFKVSAYY QRFKNYIHNE NLYREGNLFM RRYNQSQARF YGFEGEIGYQ ITPNHKITFF GDYVNGKLFG FKKFYGNPKF KKICEIPKAQ LIDIERCIED EEWGEEWDYR KIGEQIIERP NRNAARVPPM RLGFRLKSQF NDNWSSSLEY TRMFAQKRIS INTVIKEIDR EEAEKRRENA NGLGYDGHYT ELVPEDVTQG YHLLNLSLNY SRKIDGVEYS ATLSANNLLN QKIYIHNSYL PYVPQMGRNF ILNVGVTF
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