| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_1331 |
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| Symbol | |
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| ID | 8710027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 1591863 |
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| End bp | 1592636 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646483416 |
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| Product | transcriptional regulator, Sir2 family |
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| Protein accession | YP_003374514 |
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| Protein GI | 283783760 |
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| COG category | [K] Transcription |
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| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAACA AGCAATCGAG CAATAAAGCA CACCACATTG TTGTGCTCAC AGGCGCAGGA
ATCTCCACAA GCGCAGGCAT TCCTGACTTT CGCGGTCCAG ATGGAGTTTG GACTAAACAC
CCAGAGCAAA TGAGCGTTTA TGACATAGAC GCATTTTTAA GCAGTAAAGA GGAACGCGTC
TACTCTTGGC GCTGGCAAAA AGAGTCTCCC GTTTGGAACG CACAGCCAGG AACAGCACAC
AAAGCACTTG TAAAACTCGA GAAGGCAGGA ATGCTCGACC TTATAGCCAC ACAAAACTTT
GACGCACTTC ACGAAAAAGC TGGCAATAAC CCAGACATTA TAGTGAACTT GCACGGAAGC
ATTGGAACCT CACACTGCAT GAGTTGCCAC GCGAGCTATA AAACTGCCGA TATTATGGCA
GATTTAGATG AGCACCCGGA TCCGCATTGC AGGCGCACTC TGCCGTACCG CAGCAATATG
CCTTGTAATG GTCTCATAAA AACAGACGTT GTTTATTTTG GAGAAGCGCT TCCAGAAGGT
GCTATGGAAC GCAGTGCGCA AGCAATAGTT AAAGCGGACG AGCTGTGGGT TATTGGTTCC
ACGCTGGAAG TATTCCCAGC TGCCAGCCTC GTGCCGTTAG CTGCGCGCGC TGGAGTGCCG
ATTACGATAA TGAACCTGGG CTCTACGCAA TACGACTATT TGGCAGAGCG TATTATTCGC
GAAGATATTG CGAAAGCTCT GCCAAAGTTA GTAGACGAAA CTATTGCAAA GTGA
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| Protein sequence | MSNKQSSNKA HHIVVLTGAG ISTSAGIPDF RGPDGVWTKH PEQMSVYDID AFLSSKEERV
YSWRWQKESP VWNAQPGTAH KALVKLEKAG MLDLIATQNF DALHEKAGNN PDIIVNLHGS
IGTSHCMSCH ASYKTADIMA DLDEHPDPHC RRTLPYRSNM PCNGLIKTDV VYFGEALPEG
AMERSAQAIV KADELWVIGS TLEVFPAASL VPLAARAGVP ITIMNLGSTQ YDYLAERIIR
EDIAKALPKL VDETIAK
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