Gene HMPREF0424_0940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0940 
Symbol 
ID8709318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand- 
Start bp1080247 
End bp1080819 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content48% 
IMG OID646483037 
ProductATPase, YjeE family 
Protein accessionYP_003374153 
Protein GI283783399 
COG category[R] General function prediction only 
COG ID[COG0802] Predicted ATPase or kinase 
TIGRFAM ID[TIGR00150] ATPase, YjeE family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAG AAACGGTGTC AGAACAGCAA AAAGTTTGTA CTGTGCCTAC GGATACTGAT 
ATGCGCGAGC TTGGTAAAGC TGTTGCAAAG CTAGTTAAAG AAGGCGACGT TTTGCTGCTT 
TCTGGCCCTC TTGGAGCTGG TAAAACAACG TTCGCTCAAG GTTTTGGCGC AGGGCTTTCA 
ATTAGTGAGC CGATTGTGTC TCCAACTTTT ACGATTGCGC GCGAATTGCA TGGCACTTTT 
GCGGATGGTA AGCCGGCGAC GCTAATTCAC GTTGACGCTT ACCGTTTGGG TGGCGAAGAT 
TTTGCTCCGG GGCAAGATAC TGTTTCGCGT TTGCTTGACG AGCTTGAATC TTTGGGACTT 
GACGAAGCTT TGGAAGAGCC AGGAGACGGC ACTGTTGTGC TTATGGAGTG GGGTGAGCAA 
ATGGCAGGAG TGCTTGCTGC TGAGCGCTTA GAAGTTCATA TTGCAAGACC TATTGACTCT 
TCGCAAGTAG ACGATTTTAC TAGCGATGGC GAGCGAATCG TAACTTTGAA AGCTGCTGGC 
AAGGATTGGC TTAATCGACT TGCAAAATTG TAA
 
Protein sequence
MKEETVSEQQ KVCTVPTDTD MRELGKAVAK LVKEGDVLLL SGPLGAGKTT FAQGFGAGLS 
ISEPIVSPTF TIARELHGTF ADGKPATLIH VDAYRLGGED FAPGQDTVSR LLDELESLGL 
DEALEEPGDG TVVLMEWGEQ MAGVLAAERL EVHIARPIDS SQVDDFTSDG ERIVTLKAAG 
KDWLNRLAKL