| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0863 |
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| Symbol | ybeY |
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| ID | 8709626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 976609 |
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| End bp | 977169 |
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| Gene Length | 561 bp |
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| Protein Length | 186 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482963 |
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| Product | metalloprotein, YbeY family |
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| Protein accession | YP_003374080 |
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| Protein GI | 283783326 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCATTG AAGTCATGAA TGAAACAGTG TGGAATATTG ACGCTAAAAT CTTCTCAGAT
CTTGGAATGT GGGTTCTTCA ACAAATGAAA GTAAGTACGC ATTCGGATTT ATCGATTACT
TTTGTTGATC CAGAGCCAAT TGCCTGTTTG CATGAACGTT GGATGAACCT AGAAGGCCCA
ACGGATGTTA TGAGTTTTCC AATGGACGAG CTTACTCCTG GAAGCGATGA AAAAGTTTCT
GAAGGAATGC TTGGAGACTT GGTGATTTGC CCGTGGGTTG CTCAACAGCA GGCGCTCGCA
GCTGGGCACA GTACTATGGA AGAAATGTTG TTGCTAACTA TTCACGGTAT TTTGCATTTG
CTTGGCTATG ATCACACTAC TCCGGAAGAA GAAAAGCAAA TGTTTGGTTT GCAACGTCAA
CTAATGCTTA CTTTTTTCGC TGCTCGATCT GGAGAATTGT ATGATGCTAC GTTGCCGGAA
GGTGCAATAA ACGAGCTTGA GCGTTACGAT GCTGAGCATG AAGCGAGTAG CGTCAAAAAT
AAAAATAAAA AACAGCATTA A
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| Protein sequence | MSIEVMNETV WNIDAKIFSD LGMWVLQQMK VSTHSDLSIT FVDPEPIACL HERWMNLEGP
TDVMSFPMDE LTPGSDEKVS EGMLGDLVIC PWVAQQQALA AGHSTMEEML LLTIHGILHL
LGYDHTTPEE EKQMFGLQRQ LMLTFFAARS GELYDATLPE GAINELERYD AEHEASSVKN
KNKKQH
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