| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0857 |
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| Symbol | |
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| ID | 8709511 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | - |
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| Start bp | 968557 |
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| End bp | 969285 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482957 |
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| Product | hypothetical protein |
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| Protein accession | YP_003374074 |
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| Protein GI | 283783320 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2860] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGGGAA ATGCTTTGGA AGGTGCGTTA GGGGATAACA TCTTTTTTCT TATAGTTGAG
TATGTTGCTA TGGGATGTTG TGGCATGGTT GGCGGCATGT GGGCTATTCG TAAGAATTAT
GATGTTTTTG CGATTATTAC TACGTCTTGG ATAACTGCAT TGGGTGGCGG TATTGTTCGT
GATGTGTTGC TTGGAGCATT GCCGCCTGTT GGTATTGCTG ATCGTGGTTT TGTTATTACA
GGTTTGCTTT CTGGTGTTAT TGTGGCTGTT GCTCACCCTG AGATTGATAA ATGGCGTTGG
CTTATGCTTA CGCTTGATGC TTTGGCATTG GGTTTGTTTG CGGTGAATGG CACAGCAAAA
GGCTTGGATT TCCACATGTC TGGTATGGCT TCAGTATTTT TAGGAATGGC AACTGCTTTA
GGAGGCGGTT TGATTCGCGA CATGATTTTG AACCAAGTTC CTGTTATTGT GCGGGATAAG
CATTGGTACG CTTTCCCTGC TTCAGTGGGA TGTGTACTAA CCGTTTTTGT TGTAAAAGCA
AGGCATGCAG GTTATTTTGG TTTAACTGTT GAAATATTGC TTGATGTCCT TATTGTTGCT
CTTGTTGTTG CAATGCGTTT GTTGTCTGTG AAACTAGATT TAACTTTATT TGGAGCAATG
AACCGCACGG AACCTATTAA GGTTAGACGT CCTCGTATTC GTCGTATTAA TAATCGTCGT
CATCGTTAA
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| Protein sequence | MKGNALEGAL GDNIFFLIVE YVAMGCCGMV GGMWAIRKNY DVFAIITTSW ITALGGGIVR
DVLLGALPPV GIADRGFVIT GLLSGVIVAV AHPEIDKWRW LMLTLDALAL GLFAVNGTAK
GLDFHMSGMA SVFLGMATAL GGGLIRDMIL NQVPVIVRDK HWYAFPASVG CVLTVFVVKA
RHAGYFGLTV EILLDVLIVA LVVAMRLLSV KLDLTLFGAM NRTEPIKVRR PRIRRINNRR
HR
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