Gene HMPREF0424_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0840 
Symbol 
ID8709573 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand- 
Start bp951187 
End bp951843 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content37% 
IMG OID646482940 
ProductCDP-alcohol phosphatidyltransferase 
Protein accessionYP_003374057 
Protein GI283783303 
COG category[I] Lipid transport and metabolism 
COG ID[COG0558] Phosphatidylglycerophosphate synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGAAT CATTACGCAG CGGGTTTAAG CGCACTATTT CTCCAATTGC AAAATTGCTA 
GTCCGATTAG GCATAAGTGC TAACTGTGTA ACAATTGTCG GAACAATAGC TGTAGTTATT 
ATTGCTTTTG TTACTGCTTT TACTAAACAG TTTGTTGTTG GCACTATATT TTTAACTATT 
TTTGTGCTTG CGGACAGTTT AGATGGTTCT GTTGCTGCTT TGACAACAGG CGGCACAAAA 
TTTGGTGCAT TTCTTGACTC AACTCTCGAT CGCATTGCAG ACTGGTCATT ATTTTCCTCT 
GTATGCATTT GTTTGTATGA AGCTCACGAA AAAGATATGT GCACTTGGAT TTCAACTTTG 
AATGGCAATG CAATAAAGTG TGTAGGATTA TTAAGCTGTT TGGTTGCTCT TATGGCAGCT 
TTCGTAACTT CATACACTCG CGCTCGCGGT CAGTCAATAA ATGTAGATCC TAAAAAAGGT 
TTAATAACTC GTGCAGATAG AGTTGCTGTG ATTCTTGTTG CTATGGGGCT TGTTGGTCTT 
ACAAATCAAC TTTTTTGGTT AAGTTTTGCT ATGATTCTGC TTGCTATTGG CGGTATTATT 
ACAGTTTTCC AGCGTATTTT TGAAGTAAAG CATGGGCTTG ATATAAAAGA TAAATAA
 
Protein sequence
MLESLRSGFK RTISPIAKLL VRLGISANCV TIVGTIAVVI IAFVTAFTKQ FVVGTIFLTI 
FVLADSLDGS VAALTTGGTK FGAFLDSTLD RIADWSLFSS VCICLYEAHE KDMCTWISTL 
NGNAIKCVGL LSCLVALMAA FVTSYTRARG QSINVDPKKG LITRADRVAV ILVAMGLVGL 
TNQLFWLSFA MILLAIGGII TVFQRIFEVK HGLDIKDK