Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0675 |
Symbol | argH |
ID | 8709797 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 760682 |
End bp | 762199 |
Gene Length | 1518 bp |
Protein Length | 505 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 646482780 |
Product | argininosuccinate lyase |
Protein accession | YP_003373903 |
Protein GI | 283783149 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0165] Argininosuccinate lyase |
TIGRFAM ID | [TIGR00838] argininosuccinate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGATG CAACAAAAGC AGCAGCCGCA GAACTAGAAA ATAATGAAAG TAATAATACT AATCACCCTA TTGCATTGTG GGGTGGACGA TTTAGTTCAG GTCCTTCAGC AGAGCTGACG AAACTAAGCA AGTCCACACA ATTTGATTGG CGATTAGCGG ATGATGATAT TGCTGGTTCT AGAGCTCATG CGCATGCGTT GCATCGTGCA GGTCTTCTTA ACGAAAAAGA GTATGCTGAT TTATCTTGTG CATTAGATGA ATTGCAAAAG CGTGTAGATG ATGAAACTTT TGCACCCATT GAGGAAGATG AAGATGAAGC TACAGCATTA GAGCGCGGTT TACTTGAAAT TGCTGGAAAT GAGCTTGGTG GAAAGCTTCG TGCAGGTCGA TCTAGGAATG ATCAAATTGC AGCTTTAATA CGTATGTTTT TGCGTAGGCA TGCGCGCGTT ATTGCATCAT TATTGTTGTC AGTTTGCCAA GCGTTGCTGA ATCAATCAAA AAATGCAAAA GACGCAGTGA TGCCGGGTCG CACTCACATG CAACATGCTC AACCAATTTT GCTTGCGCAT CAGTTAATGG CACATGTTTG GCCGCTTTTA CGAGATGTAA ATCGCTTCAT AGATTGGGAT TTGCGTGCAG ATGAAAGCCC TTATGGAGCA GGAGCTTTGG CAGGCAATAC TCTTGGTCTT AATCCAGAAG AAGTAGCTAA AGAGCTTGGT TTTTCTAAAG TTTGCGCTAA TTCTATAGAC GCAACTGCAA GTAGAGACTT AGTCGCAGAA TTTTCATTCA TCGCAGCAAT GATTGGCGTT GATATATCAC GATTAAGTGA AGAAATTATT ATTTGGAATA CTCAAGAATT TGCATTTGTT CGTTTAGATG ATGCTTATTC AACTGGCTCA TCGATTATGC CTCAAAAAAA GAATCCAGAT ATTGCTGAAC TTGCTCGCGG TAAAGCTGGT AGATTAATAG GCGATTTAAC TGGTTTAATG GCAACTCTTA AAGGTCTTCC TACTGCTTAT GCTCGCGATT TGCAAGAAGA TAAAGAAGCT GTTTTTGATC AAATTGACAC TTTAGAAGTG CTTCTTCCAG CTTTTGCTGG AATGGTAGAA ACTATGAAAT TTGATCTAAA TAGACTTTAT GAACAGTCTT CTACTGGTTT CGCTCTTGCT ACAGATATTG CAGAATGGCT TGTAAAAAAG GGTGTTCCAT TCCGTAACGC TCATACTTTG TCTGGTTTGT GTGTAAAGCG AGCTGAGGGA ATTGGGGGAG ATCTTGCTGA TTTAAGCGAT GATGATTTTT CAAATATTCT AAGCGGTTTT GTTGATAGCG CAGAAATTGC GAATATCAGA ACAATATTGA CTAGTGCTGG ATCTGTGTCT GCCAGATGCG GTCGTGGCGG TACAGCCTTC GCACGAGTTA AAGAGCAAAT TGTAGAGGCT GAAAATGCAA TGGATAATTA TTATAAATTT GCAAATTCAA AAAGCGATGG TTCTGCTTAT ATCTCGCCTA TAAAATAA
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Protein sequence | MHDATKAAAA ELENNESNNT NHPIALWGGR FSSGPSAELT KLSKSTQFDW RLADDDIAGS RAHAHALHRA GLLNEKEYAD LSCALDELQK RVDDETFAPI EEDEDEATAL ERGLLEIAGN ELGGKLRAGR SRNDQIAALI RMFLRRHARV IASLLLSVCQ ALLNQSKNAK DAVMPGRTHM QHAQPILLAH QLMAHVWPLL RDVNRFIDWD LRADESPYGA GALAGNTLGL NPEEVAKELG FSKVCANSID ATASRDLVAE FSFIAAMIGV DISRLSEEII IWNTQEFAFV RLDDAYSTGS SIMPQKKNPD IAELARGKAG RLIGDLTGLM ATLKGLPTAY ARDLQEDKEA VFDQIDTLEV LLPAFAGMVE TMKFDLNRLY EQSSTGFALA TDIAEWLVKK GVPFRNAHTL SGLCVKRAEG IGGDLADLSD DDFSNILSGF VDSAEIANIR TILTSAGSVS ARCGRGGTAF ARVKEQIVEA ENAMDNYYKF ANSKSDGSAY ISPIK
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