| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0652 |
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| Symbol | |
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| ID | 8708812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 730880 |
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| End bp | 732169 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482758 |
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| Product | uracil-xanthine permease |
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| Protein accession | YP_003373882 |
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| Protein GI | 283783128 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG2233] Xanthine/uracil permeases |
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| TIGRFAM ID | [TIGR00801] uracil-xanthine permease |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.407453 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCAT TATTCACGTG GCAGCTTCAC GGTAATGGCA AAACGTTAAA GCCTGGTGAA
GTTGTAGAGC CAGACGAGCG TTTGACTTGG ACTCGTACTG CTGGAATTGG TGCTCAGCAT
GTTATTGCAA TGTTTGGTGC TACGTTCTTG GTGCCTATTC TTACGGGCTT TGATCCATCA
ACAACATTGA TGTTCACTGC TATTTCTACA GCACTGTTCT TACTTATTAA CGCAAATAAG
CTTCCTAGTT ATCTGGGAAG CTCTTTTGGT CTTATAGCAC CTGTTATGGC TGTAACAACA
GCTCATAAAG GTATTGCAGT TGCAAGCTTT GGCATTATGT GCACAGGTTT GCTTCTTGCT
CTTATAGGTG TGCTTGTACA TTTTGCAGGA GCTAAGTGGA TTGACATTAT TATGCCACCT
GTCGTAAACG GTGCAATCGT TGCAATTATT GGTTTTAATT TAGGACCTGC AGTTTGGACT
AACTTCCAGA AAGCTCCAGA TACAGCTCTT GTGACATTAG TTGCTGTAAT GCTTATTGCT
GTAGTATTTC GCGGTCTTCT TGGTCGTTTA AATATTCTTT TAGGTGTTCT CGTTGGTTAC
GCTTATGCAT GCTTCCAAGG TCAAGTCGAT TTTAAAAAGA TTGAAGAAGC TTCTTGGATT
GGTTTTCCTA AATTCCACAC GCCACAAGTT GATTTCTCTG TTCTACTTAT GTTCTTGCCG
GTAGTACTTG TTCTCATTGC AGAAAATGTT GGTCACGTAA AGTCTGTAGC TCAAATGACT
GGTCGCGACT ATGACTCTAA GATTGGAACT GCATTATTCG CAGATGGTTT TGGTACAGCT
ATTGCTGGTT TATTTGGCGG CTGTGGTACC ACCACGTACG GTGAAAATAT CGGTGTTATG
GCTGCAACAA AGGTTTATTC TACTGCAGCT TATTGGTGTG CTGCAGCTTT TGCTTTTATA
TTGAGCCTTT GCCCAAAGTT TGGCGCTGTT GTAAATTCAA TCCCAGCTGG TGTTCTTGGT
GGCGTGACCA CTTTGCTTTA CGGCATGATT GGCATGATTG GCGTAAGAAT CTGGGTAGAA
AACAAAGTTA ACTTCGATAA GCCAGTGAAT ATTATGATTG CTGCAATCGT TATGATTATT
GGTATTGCTA ACTTCCAGTT TGCTATTTCT GGAATTCAGT TCAACGGTAT TGCAATCGGA
ACCGTTGTGG TGTTGGTTGT ATACCACTTA CTGAAGGCTA TTGGAAAGCT TACTGGTACG
ATTGCTAAAG ATGATCCTGA TGTTGCCTAG
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| Protein sequence | MNSLFTWQLH GNGKTLKPGE VVEPDERLTW TRTAGIGAQH VIAMFGATFL VPILTGFDPS
TTLMFTAIST ALFLLINANK LPSYLGSSFG LIAPVMAVTT AHKGIAVASF GIMCTGLLLA
LIGVLVHFAG AKWIDIIMPP VVNGAIVAII GFNLGPAVWT NFQKAPDTAL VTLVAVMLIA
VVFRGLLGRL NILLGVLVGY AYACFQGQVD FKKIEEASWI GFPKFHTPQV DFSVLLMFLP
VVLVLIAENV GHVKSVAQMT GRDYDSKIGT ALFADGFGTA IAGLFGGCGT TTYGENIGVM
AATKVYSTAA YWCAAAFAFI LSLCPKFGAV VNSIPAGVLG GVTTLLYGMI GMIGVRIWVE
NKVNFDKPVN IMIAAIVMII GIANFQFAIS GIQFNGIAIG TVVVLVVYHL LKAIGKLTGT
IAKDDPDVA
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