| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0647 |
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| Symbol | proC |
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| ID | 8709171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 725912 |
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| End bp | 726715 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646482753 |
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| Product | pyrroline-5-carboxylate reductase |
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| Protein accession | YP_003373877 |
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| Protein GI | 283783123 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0345] Pyrroline-5-carboxylate reductase |
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| TIGRFAM ID | [TIGR00112] pyrroline-5-carboxylate reductase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.381317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTACTT GTGTATCTGG AACTGTTGGT TTTATAGGCT ATGGCAATAT GGCACAAGCA
ATCGCTAAAG GTGCGCTGAA TGCAGGAGTA TTGCAAGGTG AAAATATTGT TGCGTGCGCG
CATAATTTTG AAAAACTCGA GCGTAATACT TCACTAATTG GCGCTCGCGC TATGCGTACT
GCTCAAGAAG TGTGTGAAGC AAGTGATGTG ATTATTATTG CTGTAAAGCC GTATCAGGTT
GCTGAAGTGC TTAAGCCAGT TTGTGAAGTT ATTAATGAAC GAGGTATTGC TGTTATTTCC
GTTGCAGCCG GTTGGACGCT TGAGCGTTAC ATGGAACTGC TTGGCAAGAA TGCTCATGTT
CAGTGCATTA TTCCGAATAC TCCTATTGCG GTCTGCCAAG GCGTGACTTT AGCTGAAACT
ACTCATACGC TTAGTGATAG TCAACTTTCA ATGTTTAGTG CTTTATTTGA GCCAATTTCT
TTGGTAGAGC GAGTGAATAG TGATCATATG AATATTGCAA TGTGTATTTC TAGCTGTGCT
CCAGCTTTTA CAGCAATGTA TATGGAAGCG TTGGGCGATG CTGGTGTGAA ATATGGTTTG
CAACGTGATT GTGCTTACCG TTTGGCTGCA AAAATGATTG AAGGAGTAGG TGCGTTATAT
ATGGATTCGC GCACTCATCC AGGGATTATG AAAGATGCAG TGTGCTCTCC TGGAGGAACA
ACTATTCGTG GCGTTGCTGA GCTAGAATCT CGCGGATTTA GGGGAGATGT GATTGCTGCA
GTTGATGCTA TTGAAAATAA ATAG
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| Protein sequence | MGTCVSGTVG FIGYGNMAQA IAKGALNAGV LQGENIVACA HNFEKLERNT SLIGARAMRT
AQEVCEASDV IIIAVKPYQV AEVLKPVCEV INERGIAVIS VAAGWTLERY MELLGKNAHV
QCIIPNTPIA VCQGVTLAET THTLSDSQLS MFSALFEPIS LVERVNSDHM NIAMCISSCA
PAFTAMYMEA LGDAGVKYGL QRDCAYRLAA KMIEGVGALY MDSRTHPGIM KDAVCSPGGT
TIRGVAELES RGFRGDVIAA VDAIENK
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