| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0614 |
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| Symbol | |
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| ID | 8708909 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 679061 |
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| End bp | 679834 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 646482723 |
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| Product | cobalt transport protein |
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| Protein accession | YP_003373849 |
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| Protein GI | 283783095 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0619] ABC-type cobalt transport system, permease component CbiQ and related transporters |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA GATTATTAAC TTACCAACCA GGTAACACTT TTCTTCATCG CACTAATCCT
ATTGCAAAAC TAATTCTTGC TACGAGTGTT GTAATAAGCG TGTTTATTGC TAAACAGTAT
TCCGCGCTTA TTGCGCTTGC AGCTATTATT TTTATTGGCA TGGCTTTTAC TCGTGTTGTT
AAAACATTAT CTGGTCTTAT TAAAGCTATG TTAATAATTT CTTGCGTAAT GTTTTTGCTG
CAGACTGTTA TTGCTCAAAG TGGCAACTAT ATTTTCTTGT GGTTCACATT GCACGGCATT
GATATTGGTG CAAAAGCTGC TTTGAGATTG TTCTGCTTTG CTTTTCCTCT TGTTACCGTA
CTAACAGTAA CTAAATTAAA CGATCTTGCA AATGCTGTAG TCCAATATTT GCATATTCCA
TATTGTTACG CTTTTACTGT AACTACTGCG GTTCGTTTTG TGCCTATTTT TGCGCAAGAA
ATGTCTCAAA TCACAGAAGC TCAAATGGCT CGCGGAGTTG AATACGATAG TAAAAATCCA
TTTAAAAAAT TAAAACTTAT GATGCCTCTT ATTGTGCCTC TTTTGGTTTC TTCAGTGCGT
AAAGCAGATA GTTCTGCGCT AGCAGCGGAA GAGCGCGGCT TTTATTTGCG TACACGCAAG
TCTTCGTATT ATAAATACCC ATTCGGATGG CGTGGATTCT TGTCTTTAGT TATTTCTGCA
CTTATTATTG CTTTACCAAT ATGCACTTCA ATCTTTTTGC CAAATTTAGT GTAA
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| Protein sequence | MKTRLLTYQP GNTFLHRTNP IAKLILATSV VISVFIAKQY SALIALAAII FIGMAFTRVV
KTLSGLIKAM LIISCVMFLL QTVIAQSGNY IFLWFTLHGI DIGAKAALRL FCFAFPLVTV
LTVTKLNDLA NAVVQYLHIP YCYAFTVTTA VRFVPIFAQE MSQITEAQMA RGVEYDSKNP
FKKLKLMMPL IVPLLVSSVR KADSSALAAE ERGFYLRTRK SSYYKYPFGW RGFLSLVISA
LIIALPICTS IFLPNLV
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