Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0583 |
Symbol | hflX |
ID | 8709138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | + |
Start bp | 634409 |
End bp | 635947 |
Gene Length | 1539 bp |
Protein Length | 512 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 646482692 |
Product | GTP-binding protein HflX |
Protein accession | YP_003373819 |
Protein GI | 283783065 |
COG category | [R] General function prediction only |
COG ID | [COG2262] GTPases |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR03156] GTP-binding protein HflX |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.622699 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGGATA GTAATGTGGC ATCCGGGCGA GATGATGTGC TTAATTCAAA CGATTTTTCC TCCCTCGAAA ATGATTCTAA TAATATGAAT GAGCATAATC TCACCAATAA TGCAGTGCTT TATGCTCATT CGGATGTGCT TCTAGACACT ACTTCTGACA GTGAAAAGCA TGATGAAGTT TGGCAGGAGC GTGAATCTCG TAATGCTTTA AAGCGAGTAG CTGGTCTTGG CGAATTACAA GATGTTACCG AAGTTGAGTA TAGAAAGCTT CGTCTTGAGC GCGTTGTGCT AGTAGGAGTG TGGTCTAGCG CAAAAGGAAC TCTTGCTCAA GCTGAAGAAT CGTTGCGTGA GCTTGCAGCG TTGGCACAGA CTGCTGGTGC TGTTGTTTGC GATGGCATGT TGCAACAAAG ATATAGGCCG GATGCTGCAA CTTATGTTGG TTCAGGTAAA GCGCGTGAGC TTGCAGCAGT AGTTGCTCAG CATGATGCGG ATACGATTAT TGTTGACGAT GATTTACCTC CTAGCCAGCG TAGAGCTTTA GAAGATGCGA CTAAAGTTAA GGTTGTCGAT CGCACTGCTG TTATTTTGGA TATTTTTGCT CAGCACGCTA CAAGCCGTGA AGGTAAAGCT CAAGTTGAGC TTGCTCAATT GCAATATATG CTACCTAGGT TAAGAGGCTG GGGTGCTGCT CTTTCTAGGC AGGCTGGTGG TAGAGCTGCA GGAGATGCTG GTATTGGTTC TAGAGGTCCT GGCGAAACTA AAATCGAAAT GGATCGTCGA GCTATTCGCA ATCGTATTTC TAAACTTCGT CACGATATTG CGAATATGGC ACCTGCGCGC GATGTAAAAC GTGGTTCTCG TAGACGACAA GATATTCCAA CTGTAGCTGT TGTTGGATAT ACGAATGCTG GCAAGTCGTC TATTATAAAT CGCCTTACTG GATCACAAGA ATTAGTAGAA AATGCACTGT TTGCAACTCT TGATACTGCA GTACGTCGTT CTCAAACTCA AGATGGTAGA AGCTATACTT TGGTAGATAC TGTTGGTTTT GTTCGCAGAC TTCCAACTCA ACTAGTTGAA GCATTTAAAT CCACTTTGGA AGAAGTTGGA CAAGCAGATG TTATTTTACA TGTAGTTGAC GGTTCGCATC CAGATCCTAT TTCGCAAATT AATGCAGTAA ACGAAGTTCT CGCTAATATT TCTGGTGTAG AAGATATACC TCAAATTATG GCATTGAATA AATCAGACAT GATGAGTGAT GCTGCGCGAG AACGTTTTTC TTCTCTTTAT TCTGATGCCG TTATTGTTTC TGCATTTAGT GGCGAAAATT TGCAAATATT GCGCAATCGT TTAGAAGAAT TGTTACCGTC TCCTCGTGTT CGTGTAGATG TAACTTTGCC GTACGAGTTT GGTGGATTAT TATCAAAAGT TCGTGAAAAT GGTGTAGTTG AAAAAGCAGA ATATGTAGAT TCGGGGGTTG AACTTATTGC TTGGGTTGGA CCATCGTTAG CTGCAAAACT TATGAAAGTA GCGTTGTAA
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Protein sequence | MADSNVASGR DDVLNSNDFS SLENDSNNMN EHNLTNNAVL YAHSDVLLDT TSDSEKHDEV WQERESRNAL KRVAGLGELQ DVTEVEYRKL RLERVVLVGV WSSAKGTLAQ AEESLRELAA LAQTAGAVVC DGMLQQRYRP DAATYVGSGK ARELAAVVAQ HDADTIIVDD DLPPSQRRAL EDATKVKVVD RTAVILDIFA QHATSREGKA QVELAQLQYM LPRLRGWGAA LSRQAGGRAA GDAGIGSRGP GETKIEMDRR AIRNRISKLR HDIANMAPAR DVKRGSRRRQ DIPTVAVVGY TNAGKSSIIN RLTGSQELVE NALFATLDTA VRRSQTQDGR SYTLVDTVGF VRRLPTQLVE AFKSTLEEVG QADVILHVVD GSHPDPISQI NAVNEVLANI SGVEDIPQIM ALNKSDMMSD AARERFSSLY SDAVIVSAFS GENLQILRNR LEELLPSPRV RVDVTLPYEF GGLLSKVREN GVVEKAEYVD SGVELIAWVG PSLAAKLMKV AL
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