Gene HMPREF0424_0441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHMPREF0424_0441 
Symbol 
ID8709785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGardnerella vaginalis 409-05 
KingdomBacteria 
Replicon accessionNC_013721 
Strand- 
Start bp483903 
End bp484553 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content45% 
IMG OID646482556 
Productvitamin K epoxide reductase family protein 
Protein accessionYP_003373686 
Protein GI283782932 
COG category[S] Function unknown 
COG ID[COG4243] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones4 
Fosmid unclonability p-value0.00000761314 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAGCAAA CTAACGCCGC TAAAGAAGAC TATGAAACAA CACTTAGCGG ATGGAGGCAC 
TCTGCAGTAT GGACGTATGG CATTATGCTA TTTTTCTCTG CGGTAGCACT CATAACTTCG 
CTTATACTTT CTGCTGAAAC CCTTGCTTTA GCGCGCGAAC CTAATAAGCT GCTCAGTTGC 
GACTTCAACA GCGTAGTATC CTGCTCTAGA GTTGCGCAAA CTTGGCAGGC AGAAATTGTG 
AAATTTGGCG AATTAAGCTT CCCAAACGCA TTCTTTGGAA TTGCTGCAGA AAGCGTATTC 
GTAACGCTCG CAGTTATTGG AATGATTCGC GTACGCGTGC CGCGATGGTT CGCAATTTGC 
ACTTGGCTTG GTGGATTATG CGCGCTTGCC TACGCTTACT GGCTGTTTTC GCAATCTATG 
TTCGTAATTC ACGCGTTGTG CCCGTGGTGC ATTGTGCTTA TGTTCTCCAC AACAATGCAA 
TTTATATCGT TGACTCACGC AAGCGTAAGT TCGCAAAAGT TGCTTGTTAA GCGTTTTAGC 
TTGCTGGAAA GCTACTACCG TTTGCGATAC GACTTGCTCA TAGACGTGCT TTGGATTGCG 
GCATTGCTTA CTTTGATTTT GTGCCAATAT TCTAAAGTAT TTTTTGGCTG A
 
Protein sequence
MKQTNAAKED YETTLSGWRH SAVWTYGIML FFSAVALITS LILSAETLAL AREPNKLLSC 
DFNSVVSCSR VAQTWQAEIV KFGELSFPNA FFGIAAESVF VTLAVIGMIR VRVPRWFAIC 
TWLGGLCALA YAYWLFSQSM FVIHALCPWC IVLMFSTTMQ FISLTHASVS SQKLLVKRFS 
LLESYYRLRY DLLIDVLWIA ALLTLILCQY SKVFFG