| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0268 |
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| Symbol | rpsE |
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| ID | 8709344 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 291722 |
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| End bp | 292423 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 646482387 |
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| Product | ribosomal protein S5 |
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| Protein accession | YP_003373525 |
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| Protein GI | 283782771 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0098] Ribosomal protein S5 |
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| TIGRFAM ID | [TIGR01021] ribosomal protein S5, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTGAAG AAACTCAGAA CACTCAGGCA TCCGCTGAGG AGCGTAACGA TGATCGTCGT
TCTCGCCGTA ACAAGGGCGA GGGTAAACGC GGCGAACGTC GTAATCGTCG TGAAGAAAAC
CGTGGCGAAG AGCTTCTGGA TCGCGTAGTT ACTATTAACC GTGTTTCCAA GACCCACAAG
GGTGGTCGTA CCTTTAGCTT TGCAGCACTT GTTGTTGTTG GCGACGGTAA GGGCACTGTT
GGTGTTGGTT ACGGCAAGTC TCGCGAAGTT CCAGCTGCTA TTGCTAAGGG TCAGCTTGAC
GCTAAGAAGC ATATGTTCAC TGTTCCACGC ATTCGTGGCA CCGTCACTCA TCCAGTGCTC
GGTCACGATG CTGCTGGTAC TGTGTTGCTC CGTCCAGCTG CTCCAGGTAC TGGTGTAATT
GCTGGTGGTG CTGTACGCGC TGTTATGGAA TGCGCCGGCA TCACGGACAT CCTCACCAAG
TCCATGGGCT CTGCAACTGC TGTAAACGTA GTGCGTGCTA CTGTGGACGC TTTGAAGAAG
CTCGAAGAGC CAGAAGAGAT TTCTGCTCGT CGTGGTCTTT CTCTTGAGGA AGTCGCTCCT
GATGCTTTGC TCCGTGAGCG TGCTGCTGGC ATTGCCGAAG CTCGCAAGGC TCGCGAAGAA
GCTCAGGCCG CCAAGGCATC TGAAGCAAAG GATGGTGAGT GA
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| Protein sequence | MAEETQNTQA SAEERNDDRR SRRNKGEGKR GERRNRREEN RGEELLDRVV TINRVSKTHK
GGRTFSFAAL VVVGDGKGTV GVGYGKSREV PAAIAKGQLD AKKHMFTVPR IRGTVTHPVL
GHDAAGTVLL RPAAPGTGVI AGGAVRAVME CAGITDILTK SMGSATAVNV VRATVDALKK
LEEPEEISAR RGLSLEEVAP DALLRERAAG IAEARKAREE AQAAKASEAK DGE
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