| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0118 |
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| Symbol | |
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| ID | 8709020 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 138763 |
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| End bp | 140130 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 646482239 |
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| Product | chloride transporter, ClC family |
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| Protein accession | YP_003373385 |
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| Protein GI | 283782631 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0038] Chloride channel protein EriC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGTTTA AGAATGCATT GAGCTTTTTA AGCAATAAGT TAAAGCAAAT ATCAAAAACT
TTTTGCCAGC TTCGTTGGAA AGTAATATTA GCTGGGATAT TTGTCGGCGC TGTTTCTGGT
TCATTAGTAG CTTCTTACAG GCTTGGTATT GAATACGGTA CGGATTTTGC GCGTTGGATG
TATTTACAAA TCCGGCATAA CGCATGGTGG ATTTTGCCAT GTTTAATTTT TGCTGTAATT
GCAGGTCTAA TTATTGGCTG GATGAGTCGT AAAGAAAGTA TGGCTTCTGG AAGTGGTATT
CCTCAAGTCG TGGGGTATGT TAATCGCGGT TTGAATATGC GATGGCACAC GATTCTGCCA
GTGCGTTTTG TTGGCGGTTT ACTTGGTTCT TTATTTGGAT TGTCTCTTGG ACGTGAAGGT
CCATCTATTC AAATAGGTGC ATGTGGTGCT CAGATGTTGT CTCGAATTTT CCGTAAAGGT
AGGCGTGACG ATATTAAAGA GCATTATGTG GTAACTGCTG GAGCTGCAGC CGGCTTATCT
GCTGCGTTTT CTGCGCCACT TTCTGGAGTT ATGTTTGCTA TGGAGGAGAT TCAGCACGGC
TTAACTTCAA TTGTTCTTAT AGGAGCTGCT GCAGCTGCTT TATGTGCTGA TTTTGTTTCG
CAAACTTGTT TCGGATTGCG TCCAGTTCTT GATTTTGGTC AGATTCCAGA TTTGCCGATG
AACTTGCATA TTTGGATTAT TCCTCTTGGT ATTTTTGCAG GTTTTGTAGG CTCGATAATG
AATCGTTCGT TACTTGGTTT GCAAACATTA TACGGATATT TGCCAAAGTG GATGCCTGTT
GCTATTGCTT GCTTAATTGC AATACCAGTT GGCTTGTTCC TGCCTGAAGT TCTTGGTGGC
GGATCTAATT TAGTGCGACT TTCTGAATAT GGAAAAGCAA GTCTTGCAAT GCTTTGTTTG
CTATTTGTGG CAAAAATGTT GTTTACTTCT ACAAGTTTTG GCTGTGGTGC TCCTGGCGGT
ATTTTTATGC CTATTCTTGC AGTAGGTGCG CTCGCAGGTG GTGTTGCTGC GCGCTGGATT
ACTAGCGTTT CAGCATTTGG CATTGATACA AAATTTGTAT CTGTGTTTGC AGTTTGCGTT
ATGGCTGGTA CGTTGTCTGC ATCTGTAAAA GCTCCACTCA CTTCGATTTT GCTTACTGTT
GAAATGTCTG GAACTATGAT TCATACGCTC CCAGTTGCAG CTTCTGCATT TATCGCATTG
CTTATTTCAG ATATTCTAAA AACTAAGCCA ATTTATGGTG AGTTACTTGA ACGCTATATG
AAAGTTAATA AAGATTTAGT ATTGCCATCT GTAAATTCTG TAAAATAG
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| Protein sequence | MKFKNALSFL SNKLKQISKT FCQLRWKVIL AGIFVGAVSG SLVASYRLGI EYGTDFARWM
YLQIRHNAWW ILPCLIFAVI AGLIIGWMSR KESMASGSGI PQVVGYVNRG LNMRWHTILP
VRFVGGLLGS LFGLSLGREG PSIQIGACGA QMLSRIFRKG RRDDIKEHYV VTAGAAAGLS
AAFSAPLSGV MFAMEEIQHG LTSIVLIGAA AAALCADFVS QTCFGLRPVL DFGQIPDLPM
NLHIWIIPLG IFAGFVGSIM NRSLLGLQTL YGYLPKWMPV AIACLIAIPV GLFLPEVLGG
GSNLVRLSEY GKASLAMLCL LFVAKMLFTS TSFGCGAPGG IFMPILAVGA LAGGVAARWI
TSVSAFGIDT KFVSVFAVCV MAGTLSASVK APLTSILLTV EMSGTMIHTL PVAASAFIAL
LISDILKTKP IYGELLERYM KVNKDLVLPS VNSVK
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