| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HMPREF0424_0101 |
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| Symbol | |
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| ID | 8709013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Gardnerella vaginalis 409-05 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013721 |
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| Strand | + |
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| Start bp | 119897 |
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| End bp | 120871 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 646482222 |
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| Product | hypothetical protein |
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| Protein accession | YP_003373368 |
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| Protein GI | 283782614 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.250348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC AAATTAATCA ATCTGTTGAT CAATCTGTTA ATCAAGAAAC AAGCAACTCT
TACAAAACCG GCAGAAGCAT GAACGCTCAG CATCTACGTC TTACATTTAT GCACTCGCTT
AAATCTGAGA TGGTTAAGTT GCGTGGACTT GCATCAACCT GGTGGTGTAT GGCATTGGCC
ATTGTTTTGC CTGTAATTTT CAGCTTTATT ATTGCGATTG TGCAAAAAAC AATATCTAAA
GTTGACTTTA CTAAACATGG TGCGTCTGCT GGCAAATCAA GCGGTGTAGT CACCATGGGG
CCGAGCGATA AAAGCAGCCT CATTTCTTCT CAAGAAGGTA TTTTCAACTT AGTTATTAGT
TTTGCCTCTA TATCTTTGAT TATTATTGCG ATTTTTGCAG TGCTTGCTAT AACAGCTGAG
CATTCCACAA CTTCAATTCA AGCTTCGCTT ACGTCTGTAC CACGCAGGGG TATGTTCTTT
ACTGCTAAGT TTGTTGCAAT CACAATCTAC GTTTTTGTTG TGCAACTTAT TGCAATGGCA
GTTTCGTTAG TTGCTGCAGA ATTAGCATTT ATGGGTGAGA ATATCTCAGG CTTGTCTGGA
AGTAGAACAT GGCAATTACC TCTTACTCTG TTCCTTGGCT CACCTGTAAT TATGGTTGTT
GTGGCAGCAA TGGCGTACGG TTTCGGCATG ATTTGCAAGT CAACTGCTGG CGGAATTATG
TGCGTTATTG GAGCCGTGAT GATTTTGCCT ACTTTTGTTA GCATTATTAT GATTACGAGC
AATTTCGCGA AGTGGACTTC AATACTTATG CAGCTTTTGC CAGCCAAGGC TGTGAGCCGA
TTCTTAGGAA CGGGCGAACA ACTTCCGCCA GACGCAACTG CTTTCGAATG GTGGCAGTCC
GGTTTAGTGG TTCTCGCTTG GGCTGTAGTC ATGTACGCAA TTGGCTACGT TATTGAAAAG
CATCGCGATA TTTAA
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| Protein sequence | MSEQINQSVD QSVNQETSNS YKTGRSMNAQ HLRLTFMHSL KSEMVKLRGL ASTWWCMALA
IVLPVIFSFI IAIVQKTISK VDFTKHGASA GKSSGVVTMG PSDKSSLISS QEGIFNLVIS
FASISLIIIA IFAVLAITAE HSTTSIQASL TSVPRRGMFF TAKFVAITIY VFVVQLIAMA
VSLVAAELAF MGENISGLSG SRTWQLPLTL FLGSPVIMVV VAAMAYGFGM ICKSTAGGIM
CVIGAVMILP TFVSIIMITS NFAKWTSILM QLLPAKAVSR FLGTGEQLPP DATAFEWWQS
GLVVLAWAVV MYAIGYVIEK HRDI
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