Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | HMPREF0424_0061 |
Symbol | |
ID | 8709635 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Gardnerella vaginalis 409-05 |
Kingdom | Bacteria |
Replicon accession | NC_013721 |
Strand | - |
Start bp | 72664 |
End bp | 73290 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 646482182 |
Product | hypothetical protein |
Protein accession | YP_003373330 |
Protein GI | 283782576 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.424927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAAG AATACGACGA ACGTATTGCT CGTAAAGCTT TCATGTATCA AAGAAAAAGA TCTGTACTCA CTACAGTGGG CGTAGGCTTG GGCGTCACTT TTATATTTGC TTTACTTGTG CAATTCCACG CTTTTGGCAT AAATTCTGTG CGTGCTCCAA AAGATAACCC AAATTACGGC GTTCCAGCTC CATGCGCAAT AATAGGAAAA GAAGGAGCCA AAGCCCCTTA CGTAGATAAT AGAGCTGTAG CAATCAGAGT TCTCAACGGC ACAAAGTTCC GCGGCCTTGC TCGCGCGGTT GGCGAAGCTT TAAACGCTCG CGGATTTAAC TTAACAGAAG TTAACAATAA CAAATCCAGT AACATTAAAC GAACAATCAT TTACTTTGGA AAAAACGCTA TTAATGAAGC TTATACAGTA AACGCTAATT TTACCGATGC AATTATGCGA ATGGATGATA GAAAAGATAA GCTCGTCGAT ATTGTGCTTG GCTCTACTTT TAATAATCTT CGCCCTAAAG TAGATGTTCC AGCAGCAGGC GCAACAATAC ATGAAGTGCA AGGATGTATA AGAGCTGATC TTATGAAAAA CATTCCTAAG GCAGATCAGC ATAAGGAAGT TAAATAA
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Protein sequence | MTQEYDERIA RKAFMYQRKR SVLTTVGVGL GVTFIFALLV QFHAFGINSV RAPKDNPNYG VPAPCAIIGK EGAKAPYVDN RAVAIRVLNG TKFRGLARAV GEALNARGFN LTEVNNNKSS NIKRTIIYFG KNAINEAYTV NANFTDAIMR MDDRKDKLVD IVLGSTFNNL RPKVDVPAAG ATIHEVQGCI RADLMKNIPK ADQHKEVK
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