Gene Gura_3256 details

Gene Information

• Locus tag: Gura_3256
• Symbol: sdhA
• ID: 5166167
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Geobacter uraniireducens Rf4
• Kingdom: Bacteria
• Replicon accession: NC_009483
• Strand: -
• Start bp: 3827289
• End bp: 3829205
• Gene Length: 1917 bp
• Protein Length: 638 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640550746
• Product: succinate dehydrogenase flavoprotein subunit
• Protein accession: YP_001231990
• Protein GI: 148265284
• COG category: [C] Energy production and conversion
• COG ID: [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit
• TIGRFAM ID: [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000224901
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATACTCG ACGGAAAATG TCCAACCGGA CCTATAGAAA AAACGTGGGA CAAGCACCGC 
TTCGATCTGA AGCTCGTGAA TCCCGCCAAC AAGAGAAAGT ACAACGTTAT CATGGTGGGT 
ACCGGTCTGG CCGGTGGCGC TGCCGCTGCC TCGCTCGGAG AGCTCGGCTA CAACGTGCAG 
GCCTTCTGCT ATCAGGATTC TCCACGCCGC GCCCACTCCA TCGCTGCCCA GGGGGGGATC 
AACGCAGCCA AGAACTACCC TAACGATGGG GACTCCATCT ACCGTCTGTT CTATGACACC 
ATCAAGGGTG GCGACTTCCG CGCCCGTGAG GCTGACGTGT GGCGTCTGGC CCAGGTGTCC 
AACAACATCA TCGACCAGTG CGTTGCCCAA GGCGTTCCCT TTGCCCGCGA CTATGCCGGC 
TACCTGGACA ACCGTTCATT CGGTGGCGCC CAGGTTTCCC GTACCTTTTT TGCCCGCGGC 
CAGACTGGCC AGCAGCTCCT CCTCGGCGCC TACTCAGCGC TTTCCCGCCA GATAAAGGCA 
GGGACAGTGA AGATGTACAA CCGCCGCGAG ATGCTGGACC TGGTCGTGGT TGACGGCGTT 
GCCAAAGGGA TCACCTGCCG CAACCTCGTG ACCGGCGAGA TCGAGTCCTA TGCGGCCGAT 
GCGGTCTGTC TTGCCACCGG CGGCTATGTG AACGTCTTCT ACCTTTCCAC CAACGCCATG 
GGTTGTTCTG TCACCGCCAA CTGGAAAGCG TACAAGAAGG GTGCGTATTT CGCAAATCCC 
TGTTACACGC AGATCCATCC GACCTGTATT CCACAGGCCG GCGACTACCA GTCGAAACTG 
ACTCTCATGT CCGAGTCGCT CCGTAACGAC GGCCGCTGCT GGGTGCCGAA GAAGAAGGAA 
GACCTGGCCA AACACCCCAA CGAGATTCCC GAAGAAGATC GTGATTACTA CTTGGAGCGC 
AAGTATCCGA GCTTCGGCAA CCTTGCTCCC CGCGATATCG CCTCCCGTGC CGCCAAGGAA 
CAGTGCGACG ACGGCCGCGG CGTTGGCCCC GGCGGACGCG GCGTGTACCT CGACTTCGCC 
ACCTCGATTA AGCGCGTCGG AGTTGACACC ATCAAGGAAC GCTACGGCAA CCTGTTCGAG 
ATGTATGAGA AGATTACCGA CGAGGACGGC TACAAGCGCC CGATGCGTAT GTATCCTGCC 
CCCCACTACT CCATGGGCGG CCTCTGGGTC GACTACAACC TACAGAGCAG CATCCCCGGC 
CTGTTCGTCC TCGGCGAGGC CAATTTCTCT GTCCACGGCG CAAACCGCCT TGGCGCATCG 
GCCCTCATGC AGGGTCTGGC CGATGGCTAC TTCGTCATTC CCTACACCAT CGGTGGCTAC 
CTCGCCACGG TGAAACCCGG CACTGTGCAG ACCGACAACC CCGAATTCAA GAAGTCGGTT 
GAAGACGTGC AGAACTACTC CAAGAAGCTT CTCTCCATCA ACGGCAAGAA GACTGTATCG 
GAGTTCATGC GCGAGTTAGG TTCTCTCATG TGGGACAACT GCGGCATGGC GCGCTCCAAG 
GAGTCCCTGG AGGAAAACCT CAAGAAGATT CCTGCACTGC GTGAAGAGTT CTGGAAGAAC 
GTCAAGGTCT CCGGCTCCGG TGCCGATCTG AACCAGGATC TGGAGAACGC CGGCCGTACC 
GCCGACTTCC TGGAGTTCGG CGAGCTCCTC TGCCGCGATG CCCACCACCG CAATGAGTCT 
TGCGGCGGCC ACTTCCGGAC CGAATACCAG ACCGAAGACG GCGAGGCTCA ACGTGACGAC 
GAGAATTATT GTTACGTCGG CGCCTGGGAA TTCAAGGGAG ACGGCAAGGA TCCCGAGCTT 
CACAAGGAAC CGCTCAGGTT CGAGAATGTA CATCTTGCGG TAAGGAGTTA TAAATAA 

 

Protein sequence

MILDGKCPTG PIEKTWDKHR FDLKLVNPAN KRKYNVIMVG TGLAGGAAAA SLGELGYNVQ 
AFCYQDSPRR AHSIAAQGGI NAAKNYPNDG DSIYRLFYDT IKGGDFRARE ADVWRLAQVS 
NNIIDQCVAQ GVPFARDYAG YLDNRSFGGA QVSRTFFARG QTGQQLLLGA YSALSRQIKA 
GTVKMYNRRE MLDLVVVDGV AKGITCRNLV TGEIESYAAD AVCLATGGYV NVFYLSTNAM 
GCSVTANWKA YKKGAYFANP CYTQIHPTCI PQAGDYQSKL TLMSESLRND GRCWVPKKKE 
DLAKHPNEIP EEDRDYYLER KYPSFGNLAP RDIASRAAKE QCDDGRGVGP GGRGVYLDFA 
TSIKRVGVDT IKERYGNLFE MYEKITDEDG YKRPMRMYPA PHYSMGGLWV DYNLQSSIPG 
LFVLGEANFS VHGANRLGAS ALMQGLADGY FVIPYTIGGY LATVKPGTVQ TDNPEFKKSV 
EDVQNYSKKL LSINGKKTVS EFMRELGSLM WDNCGMARSK ESLEENLKKI PALREEFWKN 
VKVSGSGADL NQDLENAGRT ADFLEFGELL CRDAHHRNES CGGHFRTEYQ TEDGEAQRDD 
ENYCYVGAWE FKGDGKDPEL HKEPLRFENV HLAVRSYK