| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_3007 |
|---|
| Symbol | |
|---|
| ID | 5165585 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 3476448 |
|---|
| End bp | 3477587 |
|---|
| Gene Length | 1140 bp |
|---|
| Protein Length | 379 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 640550502 |
|---|
| Product | 2-nitropropane dioxygenase, NPD |
|---|
| Protein accession | YP_001231752 |
|---|
| Protein GI | 148265046 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCATG GGCATATAAC GTATACGGCA ACCTGTCGGA GGATGAAAGT TATGTTCAAG
CCCTTGAAAA TAGGCAAATA TGAGGTGAAA TACCCGCTGA TCCAGGGTGG CATGGGGGTG
CGCATCTCCG CCGGATCTCT GGCGGGGCAT GTGGCCAAGT GCGGCGGCGT CGGTCTGGTG
GCGGCTCCCG GCATTGCGCT GAACAGCGAA TTTTACGACG GGACCAATTA CATGCAGGCT
GATGCGGCGG CTTTCAAGGC TGAGCTGCAA AAGGCCTATG CCATTGCTCC GGATGGAGTC
ATCGGCGTTA ACGTGATGGT TGCCCTTTCC GACTTTGAGC AGTTGGTGCA GGCAGCCATT
GAGGGGGGGG CGAAGGTGGT TGTCTGCGGC GCCGGTCTCC CCATGACTTT GCCGGGGTTG
ACTGCACATG CGCCTGATGT GGCGCTGGTC CCCATCGTTT CATCGGTGCG GGCCGCCCAA
TTGATCGCCA AGAAGTGGGA CAAGGGGTAC AACCGTCTTC CCGATGCTGT GGTCGTGGAA
GACCCCGATA CTGCCGGCGG GCATTTGGGC GAAAAAATGG AAAATATCGG TACCGGTGAT
TACGACCAGT ATGCCACGGT ACGCGGGGTA AAGGAATTTT TTCTTGCAGA ATACGGCATC
GACATGCCGG TGATCGCCGC TGGCGGCATC TGGGACCGGG CCGATCTGCT TCATGCCCTG
GAGCAGGGGG CTGACGGTGT GCAGATGGCA AGCCGTTTCG TTCCAACCGT GGAATGTGAT
GCCGACGATG CCTTCAAGCA GGCCTACCTG AAGTGCAAGA AAGAGGATAT CGGCCTGATC
ATGAGCCCGG CCGGTTTGCC GGGGCGGGCC ATACTCACCA ACCAGGAGGA TATCGTCCTT
TACGACCAGG TCCGGAGCTC CGTCTGCACC ACCGGCTGCC TGAAGAAATG TTCCTTCAAG
GAGAGCGGCG AGCGGTTCTG CATCGTCAAG GCCCTTGACC GGGCCCAGCG GGGCGACGTG
GATACCGGCC TGATCTTCTG CGGCACCAAT GCCTGGAAGG CTGACCGGAT CGGCACGGTG
CAGGAGATCT TCGACGAGCT TTTCGGTGAG GCTGTTGCCG AGGCGGAAGA GGCGGCATAA
|
|---|
| Protein sequence | MVHGHITYTA TCRRMKVMFK PLKIGKYEVK YPLIQGGMGV RISAGSLAGH VAKCGGVGLV
AAPGIALNSE FYDGTNYMQA DAAAFKAELQ KAYAIAPDGV IGVNVMVALS DFEQLVQAAI
EGGAKVVVCG AGLPMTLPGL TAHAPDVALV PIVSSVRAAQ LIAKKWDKGY NRLPDAVVVE
DPDTAGGHLG EKMENIGTGD YDQYATVRGV KEFFLAEYGI DMPVIAAGGI WDRADLLHAL
EQGADGVQMA SRFVPTVECD ADDAFKQAYL KCKKEDIGLI MSPAGLPGRA ILTNQEDIVL
YDQVRSSVCT TGCLKKCSFK ESGERFCIVK ALDRAQRGDV DTGLIFCGTN AWKADRIGTV
QEIFDELFGE AVAEAEEAA
|
|---|
| |