Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_1979 |
Symbol | |
ID | 5166996 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | + |
Start bp | 2290587 |
End bp | 2291816 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640549473 |
Product | nuclease SbcCD, D subunit |
Protein accession | YP_001230742 |
Protein GI | 148264036 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | [TIGR00619] exonuclease SbcD |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAATCC TGCATACATC GGATTGGCAC ATAGGGCGGG CGCTGTATGG CCGCAAACGT TACGAGGAGT TCGAGCAATT TCTTGACTGG CTGATCGGCT GCATTGAGAC CGAAGGGATC GAGGCACTGC TTGTTGCCGG TGATGTATTC GACAACGGCA CGCCCAGCAA CCGGGCGTTG GAGCTCTATT ACCGCTTTCT GTGCCGCGTG GCCGGCGCGG GGTGCAGACA CGTGGTGGTC ACGGCGGGGA ACCACGATTC CCCTTCGCTC CTCAATGCCC CCCGCGAGGT GTTGCGCCAT CTCAACGTTC ACGTTGTCGG CTGCATGGCC GAGGCGGCGG ACGAGCTGGT GGTGCTGAAC GATAGCGACG GCAAACCCGG GCTGATTGTC TGCGCCGTTC CCTATCTGCG CGACCGCGAT ATTCGCCGGG CCGAGGCCGG AGAAACCTTT GAGGACAAGG GGCGCAAACT GGTGGAGGGG ATCCGCGACC ACTACCGGCA GGTGGGCGAA GCGGCCGTTG CCAAGCGCTC CGAGTTTGGG GGGGAGCTCC CCATTATCGC CATGGGGCAC CTTTTCACAA GCGGCGGCCA GACCGTGGAA GGCGATGGGG TGCGGGAGCT GTATGTGGGA AACCTTGGGC AAGTGCGTGC CGATGTCTTT CCCGATTGCT TCGACTACCT GGCCCTCGGG CATCTGCATG TGGCGCAGCG GGTAAACGGC TCGGACGTCC GCCGTTATTC GGGGGCGCCA ATCCCGATGA GCTTCGGCGA GGCCGGGCAA CGAAAGATCG TGGTGGCGGT TAATGCAGGC ACCGAAGGGG TTACGGTACG GGAAATACCC GTTCCTGGTT TTCAGTCGCT GGCAACGGTG CGCGGTGACT GGAAGCGTGT CAGCGAGCGT ATAGCCGCCT TGAAAAAGGA GGCCGTTTCG GTATGGCTGG AGGTGATCTA CGAAGGGGAC GAGGTCATAG GCGATCTGCA GGAACGCTTG CGCGAGCTGA TCGACGGGAG TGCACTGGAA ATCCTGCGGG CAAAGAACAT GCGCCTGGTG GAGCGGACCT TGAGCCGGAT GGCGACGGAA GAGACCCTGG ATGATCTCAC CGTTGACGAT GTGTTCGCCC GTTGCCTCGA CGCCCATGCG GTGCCGCAGG AACAGCAGGC CGAACTGGTC GCGGCCTTTC GTGAGACAGT TGCCGCATTG CACGAAGAAG CCACCCTGGG GGAACCATGA
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Protein sequence | MKILHTSDWH IGRALYGRKR YEEFEQFLDW LIGCIETEGI EALLVAGDVF DNGTPSNRAL ELYYRFLCRV AGAGCRHVVV TAGNHDSPSL LNAPREVLRH LNVHVVGCMA EAADELVVLN DSDGKPGLIV CAVPYLRDRD IRRAEAGETF EDKGRKLVEG IRDHYRQVGE AAVAKRSEFG GELPIIAMGH LFTSGGQTVE GDGVRELYVG NLGQVRADVF PDCFDYLALG HLHVAQRVNG SDVRRYSGAP IPMSFGEAGQ RKIVVAVNAG TEGVTVREIP VPGFQSLATV RGDWKRVSER IAALKKEAVS VWLEVIYEGD EVIGDLQERL RELIDGSALE ILRAKNMRLV ERTLSRMATE ETLDDLTVDD VFARCLDAHA VPQEQQAELV AAFRETVAAL HEEATLGEP
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