| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0989 |
|---|
| Symbol | |
|---|
| ID | 5163221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1171752 |
|---|
| End bp | 1173539 |
|---|
| Gene Length | 1788 bp |
|---|
| Protein Length | 595 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 640548485 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001229768 |
|---|
| Protein GI | 148263062 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00830032 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCACCTG CCCGGAACTA TTTAATTGAG TCAACTACCA ACGAAGGAGG ATTCAGCATG
AGTAGAAAAG TATTCAAGTA TTCAGCAGTG ATTGCTTCGC TTCTGTTAAC GGCAGTCTTC
GCCGGCTGCG GCACCAGCAA CAAGGAGGGG AGCGACCCAT CAGCAGTGGC TGATGTGCCC
AAGGTCTCCG AGTCCGCCTG TGCCCAGTGC CATGGGGCTT CCGTCGATCA TGTGACAGGC
GACAATATTT ACAAAGATTA CATTGCCTCT TCGCATTTTA CCAATAACTT CCGCCTCGTG
GGATGCCAAG ACTGCCATGG TGGCGGCTCA CAGCACAACG GGGTCGGTCC TCTTCCCTAT
CCCGATCCCT CCGCAGCGGG TAAATGTTTC GACTGCCACA AACCTGCTTT CCTCGGCAAC
TACGAGGCTA CCAAAGTGGC AACTGCCGTT GAGAAAGCCC ACTTTTACAA CATGACCGCC
TCGCAGCTCG ATCCGGACAA TTTTGCCCCG GCCATGTATG TTAGCGCCAA TTACCAGAAG
TCCTGCACCA GTTGTCACGA CCCCCATAAG GGCAACAACG GCGTCGGCCA GGAGCACAAG
GATTGGGCAG AATCGGGCCA CGGCAAAGTG GACAGCCCTG CCTGGGCTGA CGAGGATTTC
AAAGAGAACG CCTCCTGTAT CCGCTGCCAC ACTGCGACAG GCTACATTGA CTATGTAAGC
TCGGGATATA CGCTCCCGAC CACTACTTGG GCAAAAGCCG GCGATACAAC CCGCGAAGTC
ATTACCTGCA AGGCTTGCCA CACCGACTAC AACTTTAAGA ACAGAGTCCG AAACGCAGGC
GCCTATACAG CTCCGTACAA CAGCGGCAAG AACCCGAAGG CTTTTCCCAA TGTTGGCGCC
TCCAACCTGT GCAACGCTTG TCATGCCGGG CGTGAAAGCG GCGATACGGT TAAAGGCTTG
ACCTCCTTTA CCAACACGAG CTTCAAGAAT TCCCATTACC TGGCTGCTTC TGGGGTATTT
TACGGTCAGG CCGGCTTCCA GTATTACACT TCTAATGTGA AGTATGATAC GGGATATAAT
ACCGGCAAGA AGGATACTGC CACGACATTT GCTGCAACCT GGAACCATGG CAAAATTGGT
GTGAATAATT TCAACAACAG CGGCTCTTCC GGCCAGTGTG TTGGCTGTCA CTTCGGTAAC
GGAGGGATAT ATGCCAATTA TTCATCCCAT ACTCTATCAG CTGTCAATGT CGCTCACAGC
ACGGGCGCAA CCGGCTGCTA CGGATGTCAT TCCAGTGAAG ATATCTCAAC CTTGGTCGAG
GAAGAAAAAG CTCTATTTGA TCGCGGGATG GATTTCTTCA ACTTCACACT CGCCCAGAAT
AATATTTTCT ACACCACTAG CTACCCGTAC TTCATGACAT CGGCGGGCGG TACTACGGCA
ATCAAAAACT GGACATATGC TGCAACTGTG CCTGTCGGTC CGGCAACAGG AAACGGTGCG
AACAACATGG GCGCTGCCTT CAACTATAAT CTCCTTTTGA AAGAAAAAGG CGCCCACGTC
CATAACCGTT CTTATGCCCG TCGGTTGATT TTCGACTCCA TACAGTACCA GCAGAAAGGG
GCAGTTACCT ACTCAACTTC CACTGGAAGC ATAGGTGGCG TAACAGATCC CAACAACCAG
GTTTCCTTCA CGGCTTATTC TACGGCACAA CCTACCGGTA CGATCAGCAT TACAGGTCTT
AAGGGATGGT TGCTGAGAAG CTCGGGTGGA AAATACTACA GGCGTTAG
|
|---|
| Protein sequence | MPPARNYLIE STTNEGGFSM SRKVFKYSAV IASLLLTAVF AGCGTSNKEG SDPSAVADVP
KVSESACAQC HGASVDHVTG DNIYKDYIAS SHFTNNFRLV GCQDCHGGGS QHNGVGPLPY
PDPSAAGKCF DCHKPAFLGN YEATKVATAV EKAHFYNMTA SQLDPDNFAP AMYVSANYQK
SCTSCHDPHK GNNGVGQEHK DWAESGHGKV DSPAWADEDF KENASCIRCH TATGYIDYVS
SGYTLPTTTW AKAGDTTREV ITCKACHTDY NFKNRVRNAG AYTAPYNSGK NPKAFPNVGA
SNLCNACHAG RESGDTVKGL TSFTNTSFKN SHYLAASGVF YGQAGFQYYT SNVKYDTGYN
TGKKDTATTF AATWNHGKIG VNNFNNSGSS GQCVGCHFGN GGIYANYSSH TLSAVNVAHS
TGATGCYGCH SSEDISTLVE EEKALFDRGM DFFNFTLAQN NIFYTTSYPY FMTSAGGTTA
IKNWTYAATV PVGPATGNGA NNMGAAFNYN LLLKEKGAHV HNRSYARRLI FDSIQYQQKG
AVTYSTSTGS IGGVTDPNNQ VSFTAYSTAQ PTGTISITGL KGWLLRSSGG KYYRR
|
|---|
| |