| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0976 |
|---|
| Symbol | |
|---|
| ID | 5166777 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | + |
|---|
| Start bp | 1158161 |
|---|
| End bp | 1158985 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640548472 |
|---|
| Product | polysaccharide deacetylase |
|---|
| Protein accession | YP_001229755 |
|---|
| Protein GI | 148263049 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.0000000769924 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTCCC GTCTGCTCCT TTTCACCCTG CTGTTTTCCC TTGTCTGCGC CGTTTCCGCC
AATGCCGCAC AACCCGAGCT AAAGAAGAAT ACGCCGGTCT TAAGCCAGGC TGTGAACGTC
CCCATTCTCC TCTATCACCG CTTCGGTCCT ACCGTGGCCG ATGGCATGAC CATTACCACG
TCGGTGTTCG AGTCCCACCT CAAATATCTC CGGGATAACG GCTACAAAGT CATCCCCCTG
CGCCAATTGG TTGATTACTA CCAGAAGAAG GGGCCGGCGC CTGCGCCGAA ATCAGTGGTC
ATCGTCGAGG ATGACGCCCA TAAGACCGTT TACAGCGACA TGCTGCCGCT GGCAAAGAAG
TATAACGTGC CGGTGACGGT CTTCGTCTAC CCATCGGCCA TATCCAACGC CAAATACGCC
ATGACCTGGG ACCAGCTCCG CGCATTGAAG AAAACCGGGC TGTTCGAAGT CCAGTCCCAC
ACCTACTGGC ACCCGAATTT CAAGCGGGAC AAAAAGAAAA TGAAACCGGC CGAGTTCGAG
AAGTCGGTGG ACGTGCAGCT GCGGAAATCC AAGGCAAAGC TGGAAAAGGA GCTGGGAATA
TCGGTGGACA TGCTCGCCTG GCCGTTCGGC ATCTATGACG ATTATCTGCT GAAAAAGGCG
GCCGAAGCGG GATACAAGGT CACCTTCACC ATAGAGCGCC ACCATGCCGG TGCTACTGAT
TCGGTCATGA AACTCCCCCG TTATCTGCTC ATAAATGCCG ACCAGGGTAA GGCGTTCGCC
CAGATCCTGG CGGGAACTGC GCCCAAGCGG AATATCGCCT ATTGA
|
|---|
| Protein sequence | MKSRLLLFTL LFSLVCAVSA NAAQPELKKN TPVLSQAVNV PILLYHRFGP TVADGMTITT
SVFESHLKYL RDNGYKVIPL RQLVDYYQKK GPAPAPKSVV IVEDDAHKTV YSDMLPLAKK
YNVPVTVFVY PSAISNAKYA MTWDQLRALK KTGLFEVQSH TYWHPNFKRD KKKMKPAEFE
KSVDVQLRKS KAKLEKELGI SVDMLAWPFG IYDDYLLKKA AEAGYKVTFT IERHHAGATD
SVMKLPRYLL INADQGKAFA QILAGTAPKR NIAY
|
|---|
| |