Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gura_0970 |
Symbol | |
ID | 5162896 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter uraniireducens Rf4 |
Kingdom | Bacteria |
Replicon accession | NC_009483 |
Strand | - |
Start bp | 1150167 |
End bp | 1152254 |
Gene Length | 2088 bp |
Protein Length | 695 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640548466 |
Product | transketolase |
Protein accession | YP_001229749 |
Protein GI | 148263043 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0021] Transketolase |
TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAACG ACCTATCGTC CACTTCCATC CCGGCTGATG TACATACGCT CTGCATCAAC ACCATTCGCT TCCTGTCGGT CGATGCCGTA CAGAAGGCGA ACAGCGGCCA TCCGGGAATG CCTTTGGGAG CGGCGCCCAT GGCGTTTGTC CTCTGGACAC GATTCCTGCG GCACAATCCG GCCAATCCCG GATGGCTCGA CCACGACCGA TGCGTCCTTT CTTCAGGCCA CGGTTCCATG CTCCTCTACA GCCTGCTCCA TCTCACCGGC TACGACCTCC CCCTGGAAGA GATTGAGCGA TTCCGCCAAT GGAGGAGCCG CCCCGGCCAT ACCGATCGAT GGGTTGCACC GGGAATAGAG ACAACCACCG GCCCCCTCGG CCAGGGATTC GGCAACGCCG TCGGCATGGC AATCGCCGAA TCGCACCTCG CCGTCCGCTT CAACCGGCCC CGTTTCAAGA TAATCGACCA CTACACATAC TGCCTTGCCG GCGACGGCGA TCTCATGGAA GGAGTGGCGG CAGAAGCAGC CTCACTGGCC GGCCACCTGG GGCTGGGAAA GCTCATCTGC CTCTACGACG ACAACCGGCT CTCGCCGACG GCCTCGACAG ATCTCGCATT CACTGAAGTC AGAGCCGGGA GATTCGCTGC GTACGGCTGG CACGTGCAAA CAGTGGCGGA AGGCAATGAC CTGGCGACTA TCGGAAGGGC CATCACCAAA GCCCGGAACG AGACGTCGCG GCCGTCCATC ATTCTCATCC GCACCCACAT CGGCCACGGC TCGCCCGACA AACCGGACAG CTTCGAAGTC AACGGCTTGC CTCTTGGCGC GGAAGAGGTG AAGCTGACCA AGGAAAACCT CGGCTGGCCG TTGGATCCGC TATTTTATAT CCCCAAAAAA GCGCTCCGCT ACTTTCATCT GGCATTGAAA CAGGGGAAGA AACGGGAAGC GGAATGGAAT GCCCGGTTTG CCGCCTATGA AGAAGCATAC CCTGAGCTCG CCAAGGAACT CCGCCTGGCA ATGGCGGGAA AGCTCCCCCC CGGCTGGGAC ATGGATATTC CCGATTTCCA GGCAGACTCT AAGGGTATGG CAACCAGGGT CGCCTCGGGC ATGGTGATGA ATGCCATCGC CCCCCGGCTC ACATCGTTTC TCGGCGGATC GGCAGATCCG GACCCTTCAC CCCACACTTC CTTGAAAGGT CTGGGGGATT TCGGGAACCC CGGCCTCCCC CCCGTCGACC GGCCAGGGGC GATCGGCGAG GAAAGGGGAT ACGGCGGCCG CAACATACAT TTCGGAGTAC GCGAACATGC CATGGGAGCG GTTCTGAACG GCATGGCAGC TCACGGCGGG CTTATTCCCT TCGGCGCCAC CGTTCTCAAG TTCTCCGACT ATCTCCGCCC ATCCTTGCGT CTTGCAGCAT TGATGGGACT GCACGTAATC CACGTCTTCA CCCATGACAG CATCGGTATG GGGGAAGACG GCTTCACCCA CCAGCCGGTA GCGCATCTGG CAACACTCAG GGCCATCCCG AACCTGGTGG TGATCCGTCC CGCGGACGCC AATGAGACAG CAGTCGCCTG GCAGGTGGCG CTGGAGACAG CGGACCGGCC GGTGGCGCTT CTCCTCTCGC GGCAAGATCT CCCAATCATT GACCGGAGCC GCTACGCTAC AGCCGACGGA CTCCGTCGCG GCGGTTATAT CCTTGCTGAT GCCGAAGGCA AGCTCCCTGC ACTGATCCTC ATTGCTACCG GCTCGGAAGT GGCTCTCGTG CTTGCAGCGC GTAAGAAGCT CCTGGAAAGG AACATCCTGA CCCGGGTCGT CTCACTGCCA AGCTGGGAGC TCTTCGATCT GCAGCCGCAA GAGTACTGCG ACTCTGTCCT CCCGCCGCAG GTCAGCAGGC GACTGGCAGT TGAGGCAGGG GCGCCGCAAG GATGGCACCG CTACGTCGGC TCGGACGGAA ATGTCCTCGG AGTAGAGTGT TTTGGCGCTT CAGCTCCGGG TGACGTCGTT CCGGCTGAAT GCGGCTTCAC CGTGGAAAAC ATTTGCCGGC GAGCTCTGGC CCTGTTGGAA GAGGATGGCC CGCCATAA
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Protein sequence | MKNDLSSTSI PADVHTLCIN TIRFLSVDAV QKANSGHPGM PLGAAPMAFV LWTRFLRHNP ANPGWLDHDR CVLSSGHGSM LLYSLLHLTG YDLPLEEIER FRQWRSRPGH TDRWVAPGIE TTTGPLGQGF GNAVGMAIAE SHLAVRFNRP RFKIIDHYTY CLAGDGDLME GVAAEAASLA GHLGLGKLIC LYDDNRLSPT ASTDLAFTEV RAGRFAAYGW HVQTVAEGND LATIGRAITK ARNETSRPSI ILIRTHIGHG SPDKPDSFEV NGLPLGAEEV KLTKENLGWP LDPLFYIPKK ALRYFHLALK QGKKREAEWN ARFAAYEEAY PELAKELRLA MAGKLPPGWD MDIPDFQADS KGMATRVASG MVMNAIAPRL TSFLGGSADP DPSPHTSLKG LGDFGNPGLP PVDRPGAIGE ERGYGGRNIH FGVREHAMGA VLNGMAAHGG LIPFGATVLK FSDYLRPSLR LAALMGLHVI HVFTHDSIGM GEDGFTHQPV AHLATLRAIP NLVVIRPADA NETAVAWQVA LETADRPVAL LLSRQDLPII DRSRYATADG LRRGGYILAD AEGKLPALIL IATGSEVALV LAARKKLLER NILTRVVSLP SWELFDLQPQ EYCDSVLPPQ VSRRLAVEAG APQGWHRYVG SDGNVLGVEC FGASAPGDVV PAECGFTVEN ICRRALALLE EDGPP
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