| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gura_0945 |
|---|
| Symbol | |
|---|
| ID | 5163989 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter uraniireducens Rf4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009483 |
|---|
| Strand | - |
|---|
| Start bp | 1118831 |
|---|
| End bp | 1120186 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640548441 |
|---|
| Product | DEAD/DEAH box helicase domain-containing protein |
|---|
| Protein accession | YP_001229724 |
|---|
| Protein GI | 148263018 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000594759 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTCA CCGATTTAAA TCTGCCGGAA CAGGTGCTCC AGGGCATCGC CTACACCGGC
TTCACCGAAT GCACACCCAT CCAGGAAAAG GCCCTGCCGC CGGCCCTGGC GGGCAAGGAC
GTGGCAGGCC AAGCCCAGAC CGGCACGGGC AAGACCGCCG CATTTCTCAT CTCCCTCTTC
ACCCGCCTCC TGAAACAGGA AAAAGTCGGC ACCGAACATC ACCCGCGGGC GCTGATCCTC
GCCCCCACCC GGGAGCTGGT GGTGCAGATC GAGAAGGACG CCCAGCAGCT GGGTAAACAT
ACCGGCTTCA CCATCCAGGC CATTTACGGC GGCGTGGACT ACATGAAGCA GAAGAACGCC
CTCAAGGAGG GGGTGGACAT CGTCATCGGC ACCCCGGGCC GGCTCATCGA CTACCTGAAG
CAGAAGGTCT ACTCCCTGAA GAACATCGAG GCGCTCGTTA TCGACGAGGC GGACCGGATG
TTCGACATGG GGTTCATCGC CGACCTGCGC TTCATCCTGC GCCGCCTCCC CCCATTCGAT
GAGCGCCAGA ACCTGATGTT CTCCGCCACC CTCAACCAGC GGGTCATGGA GCTGGCCTAC
GAGTTCATGA ACGTGCCGGA AAAGGTCGCC GTCACCCCGG AGCAGATGAC CGCCGAGCGG
GTCGAGCAGG TCATCTACCA CGTGTCGCGC AAGGAGAAGT TCCCGCTTCT GTTGGGGCTC
CTGCGCAAGG AGGGGATGGA GCGGACCATG ATCTTCGTCA ACACCAAGCG GGAAGCGGAA
TTCCTCTTTG ACCGGCTCAA TGTCAACGAC TTCCCGGCGC GGGTCATCTC AGGCGACGTG
GAGCAGAGGA AACGCCTCCG CATCCTGGAA GACTTCAAGA GCGGTAAACT GCCCATCATG
ATCGCCACCG ACGTCGCCTC CCGCGGCCTC CATATCGATG GGGTCTCCCA CGTCATCAAC
TACGACCTCC CCCAGGACGC GGAGGACTAC GTGCACCGCA TCGGCCGCAC CGCCCGGGCC
GGGGCCGAAG GGAAAGCCAT CTCCCTGGCC GACGAGGATG GGGCGCTGTA CCTGGAGGAC
ATCCACGAGT ACATCAAGGA GAGGATTCCG GTGGAGTGGG CCGAGGATGA GCTGTTTGTC
CACGATTACA TACGGAGCAA GCCGAGGCCG AAACCCGCAG CGAAACCCCA CGGCAGGGCT
CCCGCTCCAA GACATGGCAA ACCAGCGGGA AAACATACTG AGAAGCCTGC TGAAAAGAGC
GCCGAGAAAC CCGCCGGCGA GGGTGAGGCA GGCGAGAAGA AGCGCCGCCG CCGGCCGCAA
AAGAAAAAGC CGGCCGGTGA AGGACAGCCC CAGTAG
|
|---|
| Protein sequence | MKFTDLNLPE QVLQGIAYTG FTECTPIQEK ALPPALAGKD VAGQAQTGTG KTAAFLISLF
TRLLKQEKVG TEHHPRALIL APTRELVVQI EKDAQQLGKH TGFTIQAIYG GVDYMKQKNA
LKEGVDIVIG TPGRLIDYLK QKVYSLKNIE ALVIDEADRM FDMGFIADLR FILRRLPPFD
ERQNLMFSAT LNQRVMELAY EFMNVPEKVA VTPEQMTAER VEQVIYHVSR KEKFPLLLGL
LRKEGMERTM IFVNTKREAE FLFDRLNVND FPARVISGDV EQRKRLRILE DFKSGKLPIM
IATDVASRGL HIDGVSHVIN YDLPQDAEDY VHRIGRTARA GAEGKAISLA DEDGALYLED
IHEYIKERIP VEWAEDELFV HDYIRSKPRP KPAAKPHGRA PAPRHGKPAG KHTEKPAEKS
AEKPAGEGEA GEKKRRRRPQ KKKPAGEGQP Q
|
|---|
| |