Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_4058 |
Symbol | |
ID | 8755749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 4255725 |
End bp | 4256984 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | Abortive infection protein |
Protein accession | YP_003410994 |
Protein GI | 284992440 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.312124 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAGCGCAG CGGTCCCGCC GGGCTGGCCC GCGGCGGACG AGGAGCCCTA CCGGGGGCCG CCGCCGACCG GGCCCTACGG TGCGCCGCCG TACGTCCCCG GGGCGCTGCG CGGCGTGCAC GCGCCGCCCG CCACGGGAGT GGTGGCCGGA CCGGTCCCGT GGCCGCTCGG GCCGGTGCCG CTGCAGCCGG GACCGCACAC GGCCCCGCCG TGGGGTCCCC CGCCCGGGAT GCGGTGGGAG CCGGCGCCGG GCACCCCCCC GCACGACACG CCGGTCGAGT TCCTGCAGGC CATGCGCAGC CGCAGCTGGC GCTGGTGGCG GCCGCTGCTG GGCCTGCTGC TGTTCACGGC CGTCTACCTC GTCGCGACCC TGGTGGTGAT CCTGGCCGGG TTCGCCGTCG GGGCCTTCCC CGACCCCACC GCGATCGACC CGACCGACCT CACCGACCCC ACCCTGCTGC TGCTCACCAA CCTCTCGCTG ATCGTCGCGA TCCCCTGCGT GTGGCTGGCC TGGGTCGCCG CCCACGGCAT GCGCCCCGGC TGGTCGTCGT CGGTGGTCGC CCGGCTGCGC TGGCGGCTGC TGCTGCCGTT CACGCTGCTG TCGCTGCCCA CGCTCGTGCT CGGCCTCCTG CTCAGCGTCC TGCTGGGCTT CCTCGCCGGG GACTGGGAGG CCACCGGCCC GGTGGCCGGC TTCGGGTGGC TGCTGCTCGT CGTGCTGCTG ACCACGCCGC TGCAGTCGGC CGCGGAGGAG TACTTGTTCC GCGGCTACCT GAGCCAGGCG ATCGCCGCGT GGGTGGGCCG GCCGCAGGCG GGTGCCGTGG TCGCCGGGGT GCTGACCGCT GCCCTGTTCT CGGCCGCCCA CCTGCCGCCC GACGTCTGGA CGTTCCTGGA CCGGTTCGCG TTCGGGCTGG CCGCCTCGGC CGTCGTCTGG CTGACCGGAG GGCTCGAGGC GGCGATCGTG CTGCACGCGG CCAACAACGT CGTGGTCTTC CTCCTGGCCG GCTGGCTGGG GGAGGGGGTG GCCACCGAGT CCGTCCCGGC CGGCACCGGC GTCCTCGTGG TGCTCGTCGA CCTGCTCGCC ATGGCCGCGT ACGTCGCCCT GGTCGCCCGC TCCCGCCTCC GGCTGCAGCC GGAGGTGCTG AGTGCCGCGT TCGACCTGCG ACCACCGTCA CCGAGGGGGG TGTCCTGGCC GCCTCCGGTC ATCGGGTATG GTCTTGTCCA GCGCCGCGAG GCGCAGCACG GCCCTTGGGG TATGGGGTAA
|
Protein sequence | MSAAVPPGWP AADEEPYRGP PPTGPYGAPP YVPGALRGVH APPATGVVAG PVPWPLGPVP LQPGPHTAPP WGPPPGMRWE PAPGTPPHDT PVEFLQAMRS RSWRWWRPLL GLLLFTAVYL VATLVVILAG FAVGAFPDPT AIDPTDLTDP TLLLLTNLSL IVAIPCVWLA WVAAHGMRPG WSSSVVARLR WRLLLPFTLL SLPTLVLGLL LSVLLGFLAG DWEATGPVAG FGWLLLVVLL TTPLQSAAEE YLFRGYLSQA IAAWVGRPQA GAVVAGVLTA ALFSAAHLPP DVWTFLDRFA FGLAASAVVW LTGGLEAAIV LHAANNVVVF LLAGWLGEGV ATESVPAGTG VLVVLVDLLA MAAYVALVAR SRLRLQPEVL SAAFDLRPPS PRGVSWPPPV IGYGLVQRRE AQHGPWGMG
|
| |