Gene Gobs_3960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGobs_3960 
Symbol 
ID8755648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeodermatophilus obscurus DSM 43160 
KingdomBacteria 
Replicon accessionNC_013757 
Strand
Start bp4157311 
End bp4158225 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content78% 
IMG OID 
ProducttRNA pseudouridine synthase B 
Protein accessionYP_003410898 
Protein GI284992344 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTAGCC GCCAGGACGC CGACGTCCCC CCGGGCCTGC TGCTGGTCGA CAAGCCCGGC 
GGCATGACCT CGCACGACGT CGTCGCCCGC GCCCGGCGGG TGCTCTCGGT CCGCCGGGTC
GGCCACGCCG GCACGCTCGA CCCGATGGCC ACCGGCCTGC TGGTCCTCGG CGTCGGGACG
GCGACCCGGC TGCTCGGCCA CGTCGGCGGG CACGACAAGA CCTACGAGGC GACCATCCGC
CTCGGCCAGA CCACCGTCAC CGACGACCGC GAGGGCGAGG TCCTCGTCAC CACCCCGGCC
GGGCACCTCG ATGACGACGC CGTCACCGCC GCCCTGGCCG CGCAGACCGG CCCGCTGCTG
CAGGTGCCCT CGTCGGTGAG CGCGGTGAAG GTCGCCGGCC GCCGCTCCTA CGACCGGGTG
CGCGCCGGCG AGGAGGTGGT GCTGGAGCCG CGGGCGGTGA CCGTCCACCG GCTCGACGTC
CACCGCGTCA CCCGCCCCGC GCCGGACCTG GTGGACGTCG ACGTGACCGT TTCGTGCACC
GCCGGCACCT ACGTCCGCGC GATCGCGCGC GACGCCGGCG CCGCCCTCGG CGTGGGCGGG
CACCTCACCG CGCTGCGCCG CACCGCCTCC GGCCCGTTCT CGGTGACCGA GGCCGCGGCG
GTCGAGGAGG CCGGGCAGGC ACTGGCCGCC GGTGGGGGAG CGGGGGTGCT CGGCCTCACC
GACGCCGCCC GCGCCGTCTT CCCGGTGCGG ACGCTGACCG AGGAGGAGGC GCGCGCCCTC
GGGTACGGGC AGCGGATCCC CGCCACCGGC ACCCCCGGCC TGCACGCCGC GCTGGACGGC
GCGGACCGAC TGGTCGCCCT GGTCGAGGAC GCCGGTGCCA CCGCCCGCGT CGCCGTGGGC
TTCCCGACCG GCTAG
 
Protein sequence
MGSRQDADVP PGLLLVDKPG GMTSHDVVAR ARRVLSVRRV GHAGTLDPMA TGLLVLGVGT 
ATRLLGHVGG HDKTYEATIR LGQTTVTDDR EGEVLVTTPA GHLDDDAVTA ALAAQTGPLL
QVPSSVSAVK VAGRRSYDRV RAGEEVVLEP RAVTVHRLDV HRVTRPAPDL VDVDVTVSCT
AGTYVRAIAR DAGAALGVGG HLTALRRTAS GPFSVTEAAA VEEAGQALAA GGGAGVLGLT
DAARAVFPVR TLTEEEARAL GYGQRIPATG TPGLHAALDG ADRLVALVED AGATARVAVG
FPTG