Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_3960 |
Symbol | |
ID | 8755648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | - |
Start bp | 4157311 |
End bp | 4158225 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_003410898 |
Protein GI | 284992344 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTAGCC GCCAGGACGC CGACGTCCCC CCGGGCCTGC TGCTGGTCGA CAAGCCCGGC GGCATGACCT CGCACGACGT CGTCGCCCGC GCCCGGCGGG TGCTCTCGGT CCGCCGGGTC GGCCACGCCG GCACGCTCGA CCCGATGGCC ACCGGCCTGC TGGTCCTCGG CGTCGGGACG GCGACCCGGC TGCTCGGCCA CGTCGGCGGG CACGACAAGA CCTACGAGGC GACCATCCGC CTCGGCCAGA CCACCGTCAC CGACGACCGC GAGGGCGAGG TCCTCGTCAC CACCCCGGCC GGGCACCTCG ATGACGACGC CGTCACCGCC GCCCTGGCCG CGCAGACCGG CCCGCTGCTG CAGGTGCCCT CGTCGGTGAG CGCGGTGAAG GTCGCCGGCC GCCGCTCCTA CGACCGGGTG CGCGCCGGCG AGGAGGTGGT GCTGGAGCCG CGGGCGGTGA CCGTCCACCG GCTCGACGTC CACCGCGTCA CCCGCCCCGC GCCGGACCTG GTGGACGTCG ACGTGACCGT TTCGTGCACC GCCGGCACCT ACGTCCGCGC GATCGCGCGC GACGCCGGCG CCGCCCTCGG CGTGGGCGGG CACCTCACCG CGCTGCGCCG CACCGCCTCC GGCCCGTTCT CGGTGACCGA GGCCGCGGCG GTCGAGGAGG CCGGGCAGGC ACTGGCCGCC GGTGGGGGAG CGGGGGTGCT CGGCCTCACC GACGCCGCCC GCGCCGTCTT CCCGGTGCGG ACGCTGACCG AGGAGGAGGC GCGCGCCCTC GGGTACGGGC AGCGGATCCC CGCCACCGGC ACCCCCGGCC TGCACGCCGC GCTGGACGGC GCGGACCGAC TGGTCGCCCT GGTCGAGGAC GCCGGTGCCA CCGCCCGCGT CGCCGTGGGC TTCCCGACCG GCTAG
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Protein sequence | MGSRQDADVP PGLLLVDKPG GMTSHDVVAR ARRVLSVRRV GHAGTLDPMA TGLLVLGVGT ATRLLGHVGG HDKTYEATIR LGQTTVTDDR EGEVLVTTPA GHLDDDAVTA ALAAQTGPLL QVPSSVSAVK VAGRRSYDRV RAGEEVVLEP RAVTVHRLDV HRVTRPAPDL VDVDVTVSCT AGTYVRAIAR DAGAALGVGG HLTALRRTAS GPFSVTEAAA VEEAGQALAA GGGAGVLGLT DAARAVFPVR TLTEEEARAL GYGQRIPATG TPGLHAALDG ADRLVALVED AGATARVAVG FPTG
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