| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_3139 |
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| Symbol | |
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| ID | 8754815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | - |
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| Start bp | 3293436 |
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| End bp | 3296075 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | transcriptional regulator, LuxR family |
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| Protein accession | YP_003410116 |
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| Protein GI | 284991562 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00942978 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGGG AGCGCGCGCT GCTGCTCGGT CGGGATGCCG CCTGCCAGGA GATCATGAGC
GCGCTGGGCG CCGACCCTCC GGGAAACGTG GTAATCGTGG GTCCAGCGGG TGCCGGCCGC
ACCCGGCTCG CCCGGGAGGC GCTGGTCCTG GCGGAGAGGA AGGGGCGTTC CACCCGCTGG
GCCGCGGGGA CGAGGGCTGC TGCCGGGGTA CCTCTCGGCG CCCTCGCACA CCTGCTCCCG
GCCATCGACA CCGGGGCGGA CACCCTGGCA CTCCTGCAGC AGGCGACCAG GGCCATCGTC
GGGGACGGAG CCTTAACGCC ACGAGTCCTG GGCGTCGACG ACGTCCACCT CCTCGATCCC
CTGTCGGTCA CCCTGCTGCA CCAGCTTGCC GCCGGCGGGG CGGTGAGCCT GGTCCTGACG
GTCCGCACCG GCAACGCGGT CCAGGACCCG GCGGCGGCCC TGTGGAAGGA CGGGCTGGCC
ACCCGCGTCG AGCTGCAGCC GCTCCAGCGC GAGGACGCCG AACTGCTGAT CGGCCGGTGC
GTGGACGGTC AGGTGCAGAC CCGGACCGTC GAGCGTCTCT GGCGGCTGAG CGCGGGGAAC
CCGCTGTACC TGCACGAACT CGTGGAGGAC GGCCTGCGCT CCGGCCGACT GAGGCGGTAC
GAGGACCTCT GGTCCTGGGT CGGGGAGATG GTCCCGTCCC AACGCCTCAC GGAGATCGTC
CTGGCTCACC TAGGAGACCT GGACGCCGAC GAGTGGCGGG CCATGCAGGT CCTCGGTACG
GCCGGGACCT GCAGCGTCGA ACAGCTGGTG GAGTTCAGCA GCCCGGACGC CGTCACGGCT
CTGGAGCGGC GCGGCACGAT CGAGGACGAC GCGGATGGAT CCGGGGAGGT CCGGGTCGCC
CACCCGCTCT ACACCGAGGT CATCCGGAGC CTCGTCCCTG AGGCCGCACG GCAACGGACC
CGTCGCCGGC TGGCCCGGGA CCAGGCCGCT GACGGACGCG ACGACCACCT CCTGCACCGC
GCCGTCGTGC TGCTCGACAG CGGAGTCACC GCGGACAGCA GCCCCCTGCT CACCGCTGGG
GCCCGTCAGG CGGTCGCGCA GCTGGACCTC CCCCTGGCCG AGCGCCTGGC CCGGGCCGCT
GTCGACGAGG GTGGCGGGTT CCCCGCCTAC GCGGCCCTGA TCGAGGCCGT CCGATGGCAG
GGCCAGCCGG CGCTCGCCGA ACGGCTGGCA GCCGCCGCAG CACCCGCGGC GACCTCCGAC
GACGACCGGG GACGGTTGGC AGCGGCGCGG GCGCTGACCC TGTTCTGCGG GCTGGGGCAG
GCCGACCAGG CGGAGGCAGT GCTCCGCGAG GCCCGGACGA CCGTGCAGGA CGGTGAGGGC
CGCGCCCTCC TCGCCGCAGC CGAGGCGATG CTGGCCTTCC TCGGTGGGGA TCCCCACCGA
GCGGTGCGGC GGGGCATGAC CGTGCTGTCC GCGCCCACGG GCGCCGCTTC CGCGCTCGCG
GCGGCAGCGG TTGCAGCCGG CCTGGCGGTG ACCGGCCGGG CGGGGCAGGC GCTGACCACG
GCGGAGTCGG GTTGGCTGGC GCTCGACTCC CATCCCGATC CGGCAGAACG GATCCACACG
CGGGTCACGC TCGCTCAGGC GGAGATCCTG GCGCTGGGTC TGAGCGGACG GTTCTGCCGA
CTCGAGCAGC GGGCGGCCGA GCTGCACCGG CAGAACCTGG CAACGGCGCC CGAGTGGATC
GGGGATGCGA TCGCCTGCGT CCACCGGGGG TGGGCGGCAC TGGCCAGCGG GCAGCCGCGC
GTGGCGAGCC GGTGGCTGGC CGAGGCGCTG CCGGCTCTCG AGGAGCGGGA TCCGATCGGC
CTGCTCCCGC TGTGCCGGTC CTCCCTGGCG GCGTCGCGAG CCCTCGTCGG AGACGTCTGC
GGCGCCCGTC GGCTGATCGA CGGCTCGCAG CCGGCCTGTG CCGGGGCGAT CGCGGTGTTC
GATCCGCTGC GGCGGATGGC GGAGGCCTGG GTCGCCGCGG CGGAGGGCCG GAGGGGCCAG
GCCGGTGTCC TCGTGCTCGA GGCGGCGGCG CTGGCCGCTC GTCAGGGCCA GGAGGCAGTC
GAGGCGGTCC TGCTGCACGA CGGGCTGCGG CTGGGGCAGG GCCCGAGGAT CGTCGACAGG
CTGTACCAGC AGGCGGAACG GCTGGACGCA CCGTTCATGG CCGACCTCGC CGCGCACGCG
GCGGCCGCTG TCGCCCAGTC CGCCGAGGGG CTGGAGGAGG TGAGCTCCCG CTTCGAGCAG
ACCGGAGCGC TGCTGTTGGC GGCGGACGCG GCGACCGGGG CCGCCTCGGC CTACGAGCAG
CGCGGGGAAC GCCGAGCGGC GGCTGCAGCC CGGCTGCGAG CGGCCACCTT CGCCCGAGAG
TGCGGACTGA CCCAGGGGTC GGCGCTCGAG GTCCTGCCCC TGCCGGCGTT GACCGCTCGG
GAGCAGGAGG TCGCCCGCCT GGCCAGTGCA GGGCTGAGCA ACCAGGCGAT CGCCGGCCGG
CTCGTGGTGT CGGTGCGCAC GGTGGAGACC CACCTCTCGC ACGCCTACGC CAAACTGGGG
ATCAGCAGCC GCGCGGACCT GAGGGCGATG CTGCCGACGG CCGCCCTGGC GCGTTCCTGA
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| Protein sequence | MAGERALLLG RDAACQEIMS ALGADPPGNV VIVGPAGAGR TRLAREALVL AERKGRSTRW
AAGTRAAAGV PLGALAHLLP AIDTGADTLA LLQQATRAIV GDGALTPRVL GVDDVHLLDP
LSVTLLHQLA AGGAVSLVLT VRTGNAVQDP AAALWKDGLA TRVELQPLQR EDAELLIGRC
VDGQVQTRTV ERLWRLSAGN PLYLHELVED GLRSGRLRRY EDLWSWVGEM VPSQRLTEIV
LAHLGDLDAD EWRAMQVLGT AGTCSVEQLV EFSSPDAVTA LERRGTIEDD ADGSGEVRVA
HPLYTEVIRS LVPEAARQRT RRRLARDQAA DGRDDHLLHR AVVLLDSGVT ADSSPLLTAG
ARQAVAQLDL PLAERLARAA VDEGGGFPAY AALIEAVRWQ GQPALAERLA AAAAPAATSD
DDRGRLAAAR ALTLFCGLGQ ADQAEAVLRE ARTTVQDGEG RALLAAAEAM LAFLGGDPHR
AVRRGMTVLS APTGAASALA AAAVAAGLAV TGRAGQALTT AESGWLALDS HPDPAERIHT
RVTLAQAEIL ALGLSGRFCR LEQRAAELHR QNLATAPEWI GDAIACVHRG WAALASGQPR
VASRWLAEAL PALEERDPIG LLPLCRSSLA ASRALVGDVC GARRLIDGSQ PACAGAIAVF
DPLRRMAEAW VAAAEGRRGQ AGVLVLEAAA LAARQGQEAV EAVLLHDGLR LGQGPRIVDR
LYQQAERLDA PFMADLAAHA AAAVAQSAEG LEEVSSRFEQ TGALLLAADA ATGAASAYEQ
RGERRAAAAA RLRAATFARE CGLTQGSALE VLPLPALTAR EQEVARLASA GLSNQAIAGR
LVVSVRTVET HLSHAYAKLG ISSRADLRAM LPTAALARS
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