| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1794 |
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| Symbol | |
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| ID | 8753465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geodermatophilus obscurus DSM 43160 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013757 |
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| Strand | - |
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| Start bp | 1860964 |
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| End bp | 1862595 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003408875 |
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| Protein GI | 284990321 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.209676 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACGCC GCCTCTCCCT CGCGAGGACC CAGCCCCGGC GCCGGGTCGC CCCCGCAGCC
GCGCCCGCCC CCTGGTGGCG GGACGCGGTC GTCTACCAGG TGTACCTGCG CTCGTTCGCC
GACAGCGACG GCGACGGCAT CGGTGACCTG CGCGGGCTGC GGCAGCGGCT GCCGTACCTG
TCCTGGCTCG GTGTCGGCGC GGTGTGGATC AACCCGCACT ACCCCTCGGG TGGCGCGGAC
GGCGGCTACG ACGTCGTCGA CTACCGGGCG GTCGACCCCG ACTACGGCGA CGTGTCCGAC
CTCGAGGCCC TGGTGGACGA CGCCCGCCGG CTGGGGCTGA AGGTCGTGCT GGACGTCGTG
CCCAACCACA CCTCGGACCA GCACCCGTGG TTCCAGGCGG CCCTGGCCGA CCCGGACTCC
CCCGAGGCCG CGCGGTACCA CTTCGCGCCG GCGTCGGAGG AGCCGCCGAA CAATTGGCGG
TCGCTGTTCG GCGGGCCGGC CTGGTCGCGC ACCCCGGACG GGCGCTGGTA CCTGCACCTG
TTCGCCCCGG AGCAGCCCGA CCTCAACTGG CGCGACCCCG TCGTGGCCGA GGACTTCGAG
CGGACCCTGC GCTTCTGGCT GGACCGCGGC GTCAGCGGCT TCCGCGTCGA CGTCGCCTAC
GGCCTCTACA AGGACGCCGG CCTGCGGGAC AACCCGGGCA GCTACTCCCC CACGCTCTTC
GGGCACGGTC CCGAGCAGGC CATGACCTGG AACCAGCCCG AGGTGCACGA CGTGTGGCGC
CGCTGGCGGT CGATCTGCGA CGAGTACCCC GACACGATGC TGGTCGGCGA GGTCTGCCTG
GCCGACCTCG AGCAGGTCGC CCTGTACTCC CGTCCCGACG AGCTGCACCA GTCGCTGTCG
TTCCGGCTGC TGAAGTCGCC GTGGGCGGTC GCGCCGTTCG CCGAGGCGAT CTCCAGTGCG
CTGGACGCCT ACGGCCGGGT CGGTGCGCCG GTGTCGTGGG TGCTGGGCAA CCACGACAAG
GAGCGGCAGG TCACCCGCTT CGGCGGCGGC GAGGTCGGCA CCGCCCGGGC CCGCGCCGCG
GCGCTGCTGA CCCTGGCGCT GCCCGGCTCG GCCTACCTGT ACGCCGGCGA CGAGCTGGGC
CTGCCGCAGG CGCACGTGCC CGACGAGGCC AAGAAGGACC CGATCTTCCA CCGCAGCGGC
GGTGCCCGCG CCGGCCGCGA CGGCTGCCGC GTGCCGATGC CGTGGAACCC CACCGAGGGC
GTCGGATTCT CACCCGAGGG CGCGGCCGAG CCGTGGCTGC CGATCCCCGC CGACTGGGGC
CGCTACGCGG TCTCGGTGCA GACGGGGCAG GGCGGCTCGA CGCTGACCCT GCACCGCCGT
GCGCTGGCGC TGCGCAAGGC GCACCCGGCG TTCGCCTCCG GCTCGGCGAC GGTGACCACC
CGCGGCGACG TGCTGACCAT CCGCTCGGTC GGCGGTGGCG AGGCGGTGCG CTGCGTGGTC
AACATGGGCA GCGAGACGGT GCTCGCCGGG TGCCCCGGCC AGGTGCTGCT CGCCTCCACC
GCGGCGGTCC GCCGCTCCGG CGGCACGGTC GCCCTCCCGC CGGACAGCGC CGTGTGGGTG
CTCGAGGACT GA
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| Protein sequence | MARRLSLART QPRRRVAPAA APAPWWRDAV VYQVYLRSFA DSDGDGIGDL RGLRQRLPYL
SWLGVGAVWI NPHYPSGGAD GGYDVVDYRA VDPDYGDVSD LEALVDDARR LGLKVVLDVV
PNHTSDQHPW FQAALADPDS PEAARYHFAP ASEEPPNNWR SLFGGPAWSR TPDGRWYLHL
FAPEQPDLNW RDPVVAEDFE RTLRFWLDRG VSGFRVDVAY GLYKDAGLRD NPGSYSPTLF
GHGPEQAMTW NQPEVHDVWR RWRSICDEYP DTMLVGEVCL ADLEQVALYS RPDELHQSLS
FRLLKSPWAV APFAEAISSA LDAYGRVGAP VSWVLGNHDK ERQVTRFGGG EVGTARARAA
ALLTLALPGS AYLYAGDELG LPQAHVPDEA KKDPIFHRSG GARAGRDGCR VPMPWNPTEG
VGFSPEGAAE PWLPIPADWG RYAVSVQTGQ GGSTLTLHRR ALALRKAHPA FASGSATVTT
RGDVLTIRSV GGGEAVRCVV NMGSETVLAG CPGQVLLAST AAVRRSGGTV ALPPDSAVWV
LED
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