Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_1300 |
Symbol | |
ID | 8752964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 1366437 |
End bp | 1369169 |
Gene Length | 2733 bp |
Protein Length | 910 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | transcriptional regulator, LuxR family |
Protein accession | YP_003408409 |
Protein GI | 284989855 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.632041 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCACCAGG GGGACGACGA CGTCCACGTC GTGGGGCCGG CCACCGCGGC GGTGCAGCTC GACGCGCTGC TCGACCGCGC CCGCACCGGC GGCCCCGTCG TGGCCCTCGT CGAGGGCCCG GCGGGGATCG GCAGGACGAC CGTCCTCCGT CGGTTCCTGC ACCGGCACGC CGACCTGCAG GTGACCGCGG CCGCCGGGCT GCCCTGGGAG AGCTCCCGGA ACGGGGCGCT GGCGCGGCGG TTGCTGGACG ACGACCCGCG GCACCTGCCC GCCCCGCCGG ACGCGGCCGA CGCGGTCGAC CTGGGCACCG CGCTGGCCGG GCGGTGGGAG TCGCGTGCGG GGGAGGGGCC GCTGGTCGTC GTGGTCGACG ACGCCCACTG CGCGGACCCG GTCTCCCTGC AGGCGATCAC CTCCGGGCTC GCCCGGCTGC GGGACGTCGC CGTCCTGGTG CTGCTCGCCC GGGCGACGGG CTGGCCGGCC GCCGGGGAGC CCCGGGCGGT CGAGGTGCTC GATCGGCTCC CCGCCGTCCC GGTGCCGGTC CCGCCGCTGG GACCGGCGGA GACCCGGCTG CTGGCGGCGC GCATCGCGGC CGTCGACCTC CCCCTGTCGG TGGCCCGCCG ACTCTGCACG CACACCGCGG GGATCCCACG GCACCTGCTC GAGCTGCTGA ACGAGACCCC ACCCGCCCGT TGGTCGGACT GGCAGACCCG GCTCCCGGTG CCGAGCCGGG TCCAGCAGCG GGTACGCCGG ACCCTCGACG GCTGTCCTCG GCCGGCCCGG GCGCTCGTCG AGGCCGCGGC CGTGCTGGGC CCGACACCGG TGCTGGCCGA CGCCGCGGCG CTGGCCGAGG TGTCCGACCC CATCGGCGCC CTCGACGAGG CCTGCGCCGC GGGCCTGCTG GAGGCGACCG CCGGCCACGG CCTGGACACG CTGGCCTTCC CGGAGCGGTT CGTCCGCGAT GCCGTCCACG CCACCCTGAC GCCCGCCGCA CGGCACCGGC TGCACCTGCG CGCGGCCACC CTCGTCACCG ACGACACCGA TCGGCTGCGC CACCGGGTCG AGGCCGCGCC CCTGCCCGAC GCCGGCCTCG CCGAGGAACT GGTGGAGCTG GCCCGCCGCA AGGCCGACGA GGGGGCCTGG GCCGTCGTCG CCGGCGCGCT CATCGACGCC GGCCGGATCA GCCCCAGCCG CGCCGCTCGG GAGGAGCGGC TGCTCGAGGC CGTCGACGCA CTCGCCGGAG CCGGCCTGCT GGGCCAGGCG GTGGACGCCC TCCCGGAGGT CGAGGCCCTT CCGTCCGGTC CACGTCGCGA CGCCGTCCTC GCCTACGTCG CGGTCCAGCG CGGCCGCCGG GCCGAGGCCG TCTCCTATCT CGACACCGCC TGGCGGCACC GCGGTTCCGA CCGGCGCGCT GCGGCGGTGG TCTGCCAGCG CCACGTCCTG CACGCCCTGG CCGACTGGGA CGGCGACGAA CTGGTGCGGT GGGCGGGCCG GGCGGGTGAG TACGCCGAGC CGGGTGCGCC GGCCGCGGTC GAGTCGCGCG CCATCGTCGG CCTGGGGCTC GCCGCCTGCG GCGCGGTCGA CGCGGCGTTC ACCGCCTACC GGCAGGCGGT GGCAGAGAGC CCGTCGGGGC CCCAGCACCA GCGATCGCGC ATGGGGCTGG GCTGGCTGTC CCTCGCCCAG GACGAACCCG AGGCCGCCCG GCGCGAGCTC GAGTCCGCCG TCCCCACCGT CCGGCAGACC GGCTCCAAGC GGATCTCCCT GTGGGCCCTG GTGTGGCTGG CCCGGACCCG GTTCGTCCTG GGTGACTGGC CCGGGGCGCT GGACGCCGTC AACCAGGCCG AGGTGCTGCT CGGCACCACC GGGCTGGACC TGCTGCGTCC CCTCGTGCAC TGGACCGGCG CGCAGGTGCG TGCGCTCCGC GGGGAGCAGG AGGCCGCGGA GCGCCACCTG CTGCTGGGCG CGGCCGCCGA GCACGACTAC ACCGTCAGAA CGGTGCCCGC GCTGCTCGCC CGGGCCTCCG TGGCAGAGGC GGCGTCGGAC TACGACGCGG TCGTCCGCCA CCTGACCCCC CTCGTGCTCC GGACACCGCG CGGCGGACTC GACGAGCCCG GGTTCTGGCC CTGGCACGAC GTCTACGCCA ACGCGCTCGT CGTGACCGGT CGGCTCCCCG AGGCCGAGGC GTTCCTGGCA CCGCACGAGG CGACGGTCCG CCGACGGGGA CACCGCTCCG CAGGTGCCCG GCTCGGCTAC GTCCGTGGCC GGCTGCTCGC CGCGCGCGGT GACCTCCTCG GTGCGGAGGA GGCGTTCGAC CAGGCACGAG CCCAGCTGGC CGGGCTGCCG ATGCCGTACG AGCGGGCCCG CGTGGACTTC GCCCACGGCG TGACGCTGCG CCGGGTCGGC CGGCGGCGGG ACGCTGCGGC GCTGCTCACC ACGGCGCGTC AGTCCTTCGC CGCCCTGGGC GCGCAGGTCT ACGTGGAGCG CTGCGACCGG GAGCTAAAGA CCGGACGGCC CGCGCCCCGC GCCGCAGAGC CCGGCACCGA GAACCTCACC GAGCAGGAAC GAACCGTCGC CACGCTCGTC GCGACCGGTC TGACCAACAA GGAGGTGGCC GCGTCGATGC TGCTGTCGGT CAAGACCGTC CAGTTCCACC TGACCCGGAT CTACGCGAAG CTCGGCGTCC GCTCGCGCTC CGAGCTCGCC GCCCGGTTCG CCCCTGCCCG GGGGCAGCGG TGA
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Protein sequence | MHQGDDDVHV VGPATAAVQL DALLDRARTG GPVVALVEGP AGIGRTTVLR RFLHRHADLQ VTAAAGLPWE SSRNGALARR LLDDDPRHLP APPDAADAVD LGTALAGRWE SRAGEGPLVV VVDDAHCADP VSLQAITSGL ARLRDVAVLV LLARATGWPA AGEPRAVEVL DRLPAVPVPV PPLGPAETRL LAARIAAVDL PLSVARRLCT HTAGIPRHLL ELLNETPPAR WSDWQTRLPV PSRVQQRVRR TLDGCPRPAR ALVEAAAVLG PTPVLADAAA LAEVSDPIGA LDEACAAGLL EATAGHGLDT LAFPERFVRD AVHATLTPAA RHRLHLRAAT LVTDDTDRLR HRVEAAPLPD AGLAEELVEL ARRKADEGAW AVVAGALIDA GRISPSRAAR EERLLEAVDA LAGAGLLGQA VDALPEVEAL PSGPRRDAVL AYVAVQRGRR AEAVSYLDTA WRHRGSDRRA AAVVCQRHVL HALADWDGDE LVRWAGRAGE YAEPGAPAAV ESRAIVGLGL AACGAVDAAF TAYRQAVAES PSGPQHQRSR MGLGWLSLAQ DEPEAARREL ESAVPTVRQT GSKRISLWAL VWLARTRFVL GDWPGALDAV NQAEVLLGTT GLDLLRPLVH WTGAQVRALR GEQEAAERHL LLGAAAEHDY TVRTVPALLA RASVAEAASD YDAVVRHLTP LVLRTPRGGL DEPGFWPWHD VYANALVVTG RLPEAEAFLA PHEATVRRRG HRSAGARLGY VRGRLLAARG DLLGAEEAFD QARAQLAGLP MPYERARVDF AHGVTLRRVG RRRDAAALLT TARQSFAALG AQVYVERCDR ELKTGRPAPR AAEPGTENLT EQERTVATLV ATGLTNKEVA ASMLLSVKTV QFHLTRIYAK LGVRSRSELA ARFAPARGQR
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