| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1093 |
|---|
| Symbol | |
|---|
| ID | 8752754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1154510 |
|---|
| End bp | 1155580 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | succinyl-diaminopimelate desuccinylase |
|---|
| Protein accession | YP_003408223 |
|---|
| Protein GI | 284989669 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.1255 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGACGC TCACCCGCGC ACTGGTCGAC GTCCCGTCGG TGTCGGGCAG CGAGGGTGCC
CTGGCCGACG CGGTCGAGGC GGCGCTGCGG GCGCTGGGCG GTCTCGAGGT GGAGCGGGTC
GGCGACGCCG TCCTCGCCCG GACCGACCTC GACCGACCCA CCCGCATCGT CCTCGCCGGT
CACCTCGACA CCGTGCCGAT CGCCGACAAC GTGCCCAGCC GGCTGGAGGA CGGCCGCCTC
TACGGCTGCG GCACCAGCGA CATGAAGGCC GGCGACGCGG TGATGCTGCG GCTGGCCGGT
CGCTTCGGCG TCCCGGGTGC TGCGCCCGCG CACGACCTCA CGTTCGTCTT CTACGACAAC
GAGGAGGTCG AGGCGGCCAA GAACGGCCTC GGCCGGGTCG CGCGCGAGCG CCGCGGCTGG
CTGTACGGCG ACCTGGCGAT CCTGCTCGAG CCCACCGACG GCGAGATCGA GGCCGGCTGC
CAGGGCACCC TGCGGGCGGT GCTGGAGGTG CCCGGCCGGC GCGCGCACAG CGCCCGCAGC
TGGCTCGGCG TCAACGCGAT CCACGGCGCG GCCGGCATCC TCGCCACCCT CGCGGCCTAC
CGGGCGCGGG AGGTCGACAT CGACGGGTGC GTCTACCGCG AGGGCCTCAA CGCCGTCCGC
ATCGAGGGCG GTGTCGCCGG CAACGTCATC CCCGACGCCT GCACGGTGAC GGTCAACTTC
CGCTACGCGC CCGACCGGGA CGAGGACGCC GCCGAGGCGC ACGTCCGCGA GGTCTTCGCC
GACGCGCTCG CCGCCGGCGT GACGCTGACC GTCGTCGACA ACGCCGGCGG TGCACTGCCG
GGCCTGTCCG AGCCGGCGGC TGCGGCCTTC GTCGCCGCCG TCGGCCGGCC GGCGCGGGCC
AAGCTCGGCT GGACCGACGT CGCCCGCTTC GCCGCCTTCG GCATCCCCGC CGTCAACTAC
GGCCCCGGCG ACCCGCAGCT GGCCCACACC CGCGAGGAGC ACGTCCTGGT CGACCGGCTG
CAGCCGGCCG AGGACGCGCT CGTCGCCCAT CTCTCCGGGA GTTCTGCATG A
|
|---|
| Protein sequence | MLTLTRALVD VPSVSGSEGA LADAVEAALR ALGGLEVERV GDAVLARTDL DRPTRIVLAG
HLDTVPIADN VPSRLEDGRL YGCGTSDMKA GDAVMLRLAG RFGVPGAAPA HDLTFVFYDN
EEVEAAKNGL GRVARERRGW LYGDLAILLE PTDGEIEAGC QGTLRAVLEV PGRRAHSARS
WLGVNAIHGA AGILATLAAY RAREVDIDGC VYREGLNAVR IEGGVAGNVI PDACTVTVNF
RYAPDRDEDA AEAHVREVFA DALAAGVTLT VVDNAGGALP GLSEPAAAAF VAAVGRPARA
KLGWTDVARF AAFGIPAVNY GPGDPQLAHT REEHVLVDRL QPAEDALVAH LSGSSA
|
|---|
| |