| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gobs_1080 |
|---|
| Symbol | |
|---|
| ID | 8752741 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geodermatophilus obscurus DSM 43160 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013757 |
|---|
| Strand | + |
|---|
| Start bp | 1141148 |
|---|
| End bp | 1142071 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003408210 |
|---|
| Protein GI | 284989656 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.810626 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCCGCT ACGTCGCGCG CCGCCTGCTG CTCACCATCC CGGTCCTGAT CGGCGCGTCG
TTCCTCATCT TCGCGATGGT GTACGCGCTG CCGGGCGACC CGATCCGGGC CCTCGGCGGG
GACCGCCCGC TGGCGCCCGC GGTCGTCGCC CAGCTCCGAG ACGAGTACAA CCTCGACGAT
CCGCTGCTCG TCCAGTACGC GAAGTACGTC GGGGACCTGC TCCAGGGGGA CTTCGGCACC
GACTTCCGTG GCCGGGATGT GCTCGACACC ATCCAGCAGC GCCTGCCGGT CACCGTGCAG
CTGACCGTCG TCGCGATCGC CTTCGAGGCG GTCATCGGCA TCGTCGCCGG CGTCCTGGCC
GGCATCCGCC GCAACGGCTT CCTGGACAAC CTGGTGCTCG TCTCGAGCAC GCTCGTCGTG
TCCATCCCGA TCCTGGTGCT GGCCTTCGTC GCCCAGTTCG TGTTCGGGCT CCAGTTGGGG
TGGTTCCCGG TCTCCGGCGT CGGCGACGGG TGGTACAGCT TCCTGCTGCC CGGGCTCGTG
CTGGCGGCGA GCTCGTTGGC CTACGTCGCC CGGCTGACCC GGACCAGCGT CGCGGAGAAC
ATGCGCGCCG ACTACGTCCG GACGGCCCGG GCCAAGGGGT TGCCCAACCG CACGGTGGTC
GTCCGGCACA CCCTGCGCAA CAGCCTGATC CCGGTGGTCA CCTTCATCGG CGCCGACATC
GGCACGCTGA TGGGCGGTGC GATCGTCACC GAGTCGGTCT TCAACCTGCC CGGCATCGGA
CGGGCCGTCT TCGACGCCGT CCGCTCCCAG GAGGGTGCGG TGGTCGTCGG CATCGTGACG
CTGCTCGTCA TGTTCTTCAT CTTCTTCAAC CTGGTGGTCG ACGTGCTGTA CGCCGTCCTC
GACCCGAGGA TCCGCTATGA CTGA
|
|---|
| Protein sequence | MGRYVARRLL LTIPVLIGAS FLIFAMVYAL PGDPIRALGG DRPLAPAVVA QLRDEYNLDD
PLLVQYAKYV GDLLQGDFGT DFRGRDVLDT IQQRLPVTVQ LTVVAIAFEA VIGIVAGVLA
GIRRNGFLDN LVLVSSTLVV SIPILVLAFV AQFVFGLQLG WFPVSGVGDG WYSFLLPGLV
LAASSLAYVA RLTRTSVAEN MRADYVRTAR AKGLPNRTVV VRHTLRNSLI PVVTFIGADI
GTLMGGAIVT ESVFNLPGIG RAVFDAVRSQ EGAVVVGIVT LLVMFFIFFN LVVDVLYAVL
DPRIRYD
|
|---|
| |