Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gobs_0493 |
Symbol | |
ID | 8752147 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geodermatophilus obscurus DSM 43160 |
Kingdom | Bacteria |
Replicon accession | NC_013757 |
Strand | + |
Start bp | 539664 |
End bp | 541472 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003407646 |
Protein GI | 284989092 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.518307 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGCAC CCCTGAACCT GGTCAACCTC GAACGGGTGC ACAAGGCGCA CGGCACCACC GTCATCCTCG ACGACGTCTC CCTCGGCGTC GCCGCGGGTG AGCGGATCGG TGTCGTCGGC CGCAACGGCG GCGGCAAGAG CACCCTGCTG TCGCTGATGA CCGGCGCCGA CCAGCCAGAC TCCGGCCGCG TCACCCGCCG CGGCGACCTC GCCATGGGCG TCCTGGACCA GTCAGGCACG CTCCCGCCCG GGACGACCGT GCGCGACGTC GTCCTGCCGC CCTCGATGTT CGCCGCCGAG CACGAGTGGG CCGGCGACCC GGCCGTCCGC TCCGTCCTCA CCGGCTTGGA GCTGGACCGG CTCGGCCTCG ACGCTCCCGT CGCGCCGATG TCCGGCGGCG AGCGGCGGCG GGTCGCGCTG GCCGCCCAGC TGATCCGGCC ACTGGACCTG CTGGTCCTGG ACGAGCCGAC CAACCACCTG GACGTGGAGG GCGTCGCCTG GCTCGCGGAG TACGTGAAGG CCCGCGCCGG TGGCCTCGTC GTCGTCACCC ACGACCGGTG GTTCCTCGAC GAGGTCTCCA CCACCACGTG GGAGGTCGCC GACGGCAAGG TGCACGCCTA CGACGGCGGG TACTCGGCGT ACACGCTGGC CCGGGCGGAG CGGGCGCGGA TCTCGGCGGT ACAGGAACAG CGGCGGCTCG ACCTGGTGCG CAAGGAGCTG GCCTGGCTGC GCCGCGGTCC GCCGGCCCGC ACCAGCAAGC CGAAGTTCCG GATCGAGGCG GCCCAGGCAC TGATCGCCGA CGAGCCGCCG GCGCGGGACT CGATGGCGCT GAAGGGCTTC GCCGCCCGGC GCCTCGGCAA GACCGTCTAC GACGTCGAGG ACGTCGACTA CGCCGTGCCC ACCGAGGACG GGCCGCGGCC GTTGTTCGAG GACCTGACCT GGCACGTCGG CCCGGGCGAC CGGATCGGCG TCGTCGGGGT CAACGGGGCC GGGAAGACGT CGCTGCTGCG GCTGCTGGTC GGCGAGACCG AGCCCGACCG CGGCCGGGTG GTGCGCGGGC AGACCGTCGC GCCGGCGTAC CTGTCGCAGC ACGTCACCGA GCTGCCCGGC CGCCTCCGGG TGCTGGAGGC GGTGCAGGAG ATCGCCCGCA TCGCCCGGAT CGGCAACCAG GAGATCTCGG CGTCCTCCCT GGCCGAGCGT TTCGGGTTCG CGGCGAACCG GCAGTGGACA CCGGTCGGCG ACCTCTCCGG CGGTGAGCGG CGCCGGCTCC AGCTGCTGCG GCTGCTGATG GCCGAGCCGA ACGTGCTGCT GCTCGACGAG CCCACCAACG ACCTCGACAT CGACACGCTC ACCGCGCTGG AGGACCTGCT CGACGGCTTT CCCGGAACGG TGCTGGTGGT CAGCCACGAC CGGTACTTCG TCGACCGGGT GTGCGACAAG GTGGTGGCCC TCCTCGGTGA CGGCACGCTC GCCGAGCTGC CCGGTGGCGT GGAGGAGTAC CTGCAGCGGC GCGCGGCCGG TGGTGCGCCG CTGACCACGA CGGCCGGTAC CGCCGCCGGG GCTCCTCCCG CATCCCGCCC GGCCGTCTCC GCCGCCGACT CCCGCGCGGC CAAGAAGGAG GCCAGCCGGC TGGAGCGACG GATGCTCAAG CTGGACGCCG ACGAGAAGCA GCTGCACGAG CAACTGGCCG CCGCGGCGAC CGACTACGCG AAGGCCGCCG AGTTGGACGG GCAACTGCGG GCGGTGCGGG CGGAGAAGGA ACAGGTCGAG GAGGACTGGC TGACGGCAGC CGAGGTCGCC GAGGGCTGA
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Protein sequence | MSAPLNLVNL ERVHKAHGTT VILDDVSLGV AAGERIGVVG RNGGGKSTLL SLMTGADQPD SGRVTRRGDL AMGVLDQSGT LPPGTTVRDV VLPPSMFAAE HEWAGDPAVR SVLTGLELDR LGLDAPVAPM SGGERRRVAL AAQLIRPLDL LVLDEPTNHL DVEGVAWLAE YVKARAGGLV VVTHDRWFLD EVSTTTWEVA DGKVHAYDGG YSAYTLARAE RARISAVQEQ RRLDLVRKEL AWLRRGPPAR TSKPKFRIEA AQALIADEPP ARDSMALKGF AARRLGKTVY DVEDVDYAVP TEDGPRPLFE DLTWHVGPGD RIGVVGVNGA GKTSLLRLLV GETEPDRGRV VRGQTVAPAY LSQHVTELPG RLRVLEAVQE IARIARIGNQ EISASSLAER FGFAANRQWT PVGDLSGGER RRLQLLRLLM AEPNVLLLDE PTNDLDIDTL TALEDLLDGF PGTVLVVSHD RYFVDRVCDK VVALLGDGTL AELPGGVEEY LQRRAAGGAP LTTTAGTAAG APPASRPAVS AADSRAAKKE ASRLERRMLK LDADEKQLHE QLAAAATDYA KAAELDGQLR AVRAEKEQVE EDWLTAAEVA EG
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