| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_3143 |
|---|
| Symbol | |
|---|
| ID | 3740917 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Geobacter metallireducens GS-15 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007517 |
|---|
| Strand | - |
|---|
| Start bp | 3540161 |
|---|
| End bp | 3542029 |
|---|
| Gene Length | 1869 bp |
|---|
| Protein Length | 622 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 637780430 |
|---|
| Product | resolvase-like:recombinase |
|---|
| Protein accession | YP_386081 |
|---|
| Protein GI | 78224334 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1961] Site-specific recombinases, DNA invertase Pin homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 92 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACGAC CTCTTTGTAT TTCGTATATC CGGTTTTCAA AAGCAACACA AGCAGAGGGA
AGCAGCTTGG AAAGACAGCT TCAACTCTCC CGAACGTACG CAGAAGAACA CGGGTTAGTG
CTAGATGATA AACATTCCTA TCAAGATTTG GGTAAGTCCG CCTTCACGAG TGAACATGTC
AAGGAAGGTG AATTTGGTGT ATTTCTCGAA TTTGTGAAGC AAGGACGGGT GCCTAAAGGA
TCGGTTCTTC TAGTCGAATC GCTGGACCGA TTGAGTCGAG AGAGTGTATT GACAGCCTTC
AAGCAATTTC AAGAGATTTT GGACGCTGGC ATCAAAATCG TTACTCTTAG TGACAAAATG
GAGTACACAA AAGAAGGATT TGAAGCGAAT ATCGGCAACA TATTCATTTC CTTGGGTATT
ATGGCTCGTG CAAATGAAGA AAGCTTGCGG AAATCAGAAC GAATATGTGC GGCGTGGCGT
CTGAAGCGCA AAAATCTTCA CAATATAAAG TTGACAGCGA ATTGTCCAGG GTGGCTTGAA
CTAACTCCTG ACAAGAAAGA TTTTATACTG AAAGAAGACA GAGTCGAAAT TGTAAAACAA
ATATTTGAAT TATCTTTATC TGGTCTTGGT GTAAAGGCAA TATCAACCAT ATTAAATAAA
CAAAAAATAG AACCTTTTAG GTCAAAAATA GGTTGGTATC AGACAACCGT CAGAAAAATC
CTTTCCAATA GTGCTGTGAT TGGAGAGTTT CAGCCACATG TGTTTGGCTC AAAACATTCA
AAACCGGTTC CGGACGGTGA ACTAATCAAA GATTATTTTC CTCCTATTAT AGACACCGAT
ACATTCTATG CAGTACAAGC TAAATTGAAA AACGGAGCAC ATAGACCTGG TAGAACTGCT
AAAGTAGAAA ATTTGTTTAG CGGATATACA AGGTGTGGTT ACTGTGGTTC ACGTATGGAT
GTTGTTGCTA GGCATAACGT TGGAGGTGAA GTAAGGTATC TGGTATGTGA TAGTGCAAGA
CGCGGAGTCA AGTGTAGTTA CATTTCTATG AAATGTAATG AGATCGAGAA AGCATTTTTT
GAATATTGCA GAGAAATTGA TATTAGATAT GTGCTTAGAG CAGAACAACA GGCAGACCAG
AATAGATTAA ATGAACTGAG AAAAAGCTTA ACGGCAAGAA ATGGCAAACT AATGAAGGTG
CAAAAACAAA TTGATATGTT GAATGTTTTT TTAGATGATA TTACTGAAAG AGCAGAATTA
GAGCATTACC ACGAACAGAT AAAGAAAAAG TTAGAAGAAA AAACAAACCT ATCTGAAGAG
ATAGAAAAAT TGAGTAAGGG AATATGCATC GCAGAATATG ATAATAATAA TATAGATGTT
AGAGTGCAAA ATTTGCTTAC TTTGGATAAG GCACAGAATA AATCAGTGAA AGAAGATGAC
AAAATAATGT TTAGAATCAG ATTGCGTGAC GAGTTAAGAC AAATAATAAG CCAAATATTA
GTATACCCGA GAGGAAGCGT CTTTAGTGAT GAACAGATAG AACAGAAAGA AAGAGACTAC
GAAATTAAAA TAAAAAGTGC ATCTGATTCA GAAAAACACA TTCTGAAGCA TGAAAAAACC
ATTGATTTGG ATGGAATGAG GCAGTCACAG CAAAACACAA AAGATGATAG ATTCTTCGTC
GTCAGGTTCA AAAACGGTAA CTACCGAACT ATTAAATACG ACAAGAAACA ACAAGCGTAC
CGGGTAACTT CAGAATTAAT TAACGATAAA TTGAATTGGT GGATGGGGAA TAAAGAAATG
GCGCCAATAT TTAGAGAAGA GGAAGAATTA CACCCATTCG AAACCGAATT TGAACTGGAT
TCAAATTAG
|
|---|
| Protein sequence | MERPLCISYI RFSKATQAEG SSLERQLQLS RTYAEEHGLV LDDKHSYQDL GKSAFTSEHV
KEGEFGVFLE FVKQGRVPKG SVLLVESLDR LSRESVLTAF KQFQEILDAG IKIVTLSDKM
EYTKEGFEAN IGNIFISLGI MARANEESLR KSERICAAWR LKRKNLHNIK LTANCPGWLE
LTPDKKDFIL KEDRVEIVKQ IFELSLSGLG VKAISTILNK QKIEPFRSKI GWYQTTVRKI
LSNSAVIGEF QPHVFGSKHS KPVPDGELIK DYFPPIIDTD TFYAVQAKLK NGAHRPGRTA
KVENLFSGYT RCGYCGSRMD VVARHNVGGE VRYLVCDSAR RGVKCSYISM KCNEIEKAFF
EYCREIDIRY VLRAEQQADQ NRLNELRKSL TARNGKLMKV QKQIDMLNVF LDDITERAEL
EHYHEQIKKK LEEKTNLSEE IEKLSKGICI AEYDNNNIDV RVQNLLTLDK AQNKSVKEDD
KIMFRIRLRD ELRQIISQIL VYPRGSVFSD EQIEQKERDY EIKIKSASDS EKHILKHEKT
IDLDGMRQSQ QNTKDDRFFV VRFKNGNYRT IKYDKKQQAY RVTSELINDK LNWWMGNKEM
APIFREEEEL HPFETEFELD SN
|
|---|
| |