Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Gmet_2778 |
Symbol | |
ID | 3739281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Geobacter metallireducens GS-15 |
Kingdom | Bacteria |
Replicon accession | NC_007517 |
Strand | - |
Start bp | 3141686 |
End bp | 3143053 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637780063 |
Product | penicillin-binding protein, transpeptidase |
Protein accession | YP_385721 |
Protein GI | 78223974 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000140543 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | 70 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGATT TTAAACATCT GACGAGAAAG CGCCGTTTTT CATTTTCCGC CCTCACCGGG CGCCGGAAAG ACCCTCCCCG CAACTCCTTC AAAAGACTCG AAAGCAAGGG GCTCGAAGAA TCGAAGCCCC GGAAAAAAAG TCTTCGGGTC CTCCTTCCCG TGCTGGCGGC CCTTATCGCC GCCTATCCGG TGTTTTCTTC CGTGCTTTCG GGGCGAACGG CCGTTTCCAG CGATCAGAAG GAGGCGCAAT CTGCCGGGAA GCTTCCCCGC GATCTGGATA TCTACAGCTC CTTCCGTCTC GGTGCCGGCC TCTTTCCCCA GGCCCGGCTT GAAGGCGACC GCCTCGTTGC TCCCGTTCCC GAAGGGGGGA GAGTGGTCTT TGCCATCGAC AGTACGATTC AGGAGAGGGT CAGGGAGGTC CTGACCCAGT TCGATGTTCC CTATGGGGTC TTTGTTGCCA TCGAACCCAA GAGCGGCAAG GTCCTGGCCA TGGTTTCCCA CTCGTCCGTC TCTCCCGAGT GGGAGGAGCG GGCCTTTTAC GGGGTCTACC CCATGGCCTC CCTCTTCAAG ATCATCACCG CCACGGCGGC CCTGGAACAG GGGAAGGTAA CCCCCGATAC GGTCATCCCC TTCCGGGGAG GGCTCTATTC GGAGAGTGCC CGCTACTGGA GTTCCCTCCC GAAGCGGGGC GCCCAGGAGA TGGACCTGAC GACCGCCATG GGGAAATCGG TCAACCCGGT CTTTGGCCGG GTCGCCTGCG ATATCGCCGG GAGGGAGTCG GTGCTGCGCT GCGCCGAGCG CTACGGGTTC AACCACTACC TCCTCCCCGG CACCCCGGTC CAGCCGAGCC GGGCCGAGTA TCCCCGGACC GACAACGATC TGCGCCTCAT GGGTGCCGGC CTCGGCCGGG AAGTGAAGAT CTCTCCCATC CATGTGGCAG TCATGATGGC AGCCATCGCC AACGGCGGCA CCATGCTCGC CCCCTCCCTC GTGGAGGAGA TCAGGAACAC CGGAAACAAG GTGACCTACA CGCATCAGCC CCGGACCATC CGCTCCATCG CGGCTCCCGA GGTGACTGCC CAGCTCACGC GAATGCTCTC CACCACCGTC ACCAGCGGCA CTTCCCGCCG AGCCTTCCAC GACAACCATG GACGTCCCCG GATCGCCAAT GTCAACATAG CCGCCAAGAC CGGCTCCATC AACGGCACTG ATCCCGAGGG GCATTACAAC TGGTTTGCCG CCTACGCTCC CGTTGAGAAT CCGCAGATCG CCCTCGCCGC CCTCGTCATC AATCAGGACA AGTGGAAAAT CAAGGCGTCA TATCTGGGTG AACAGGCCCT GGAGGCGTTT TTCGCCAAGG GGCGGTAA
|
Protein sequence | MQDFKHLTRK RRFSFSALTG RRKDPPRNSF KRLESKGLEE SKPRKKSLRV LLPVLAALIA AYPVFSSVLS GRTAVSSDQK EAQSAGKLPR DLDIYSSFRL GAGLFPQARL EGDRLVAPVP EGGRVVFAID STIQERVREV LTQFDVPYGV FVAIEPKSGK VLAMVSHSSV SPEWEERAFY GVYPMASLFK IITATAALEQ GKVTPDTVIP FRGGLYSESA RYWSSLPKRG AQEMDLTTAM GKSVNPVFGR VACDIAGRES VLRCAERYGF NHYLLPGTPV QPSRAEYPRT DNDLRLMGAG LGREVKISPI HVAVMMAAIA NGGTMLAPSL VEEIRNTGNK VTYTHQPRTI RSIAAPEVTA QLTRMLSTTV TSGTSRRAFH DNHGRPRIAN VNIAAKTGSI NGTDPEGHYN WFAAYAPVEN PQIALAALVI NQDKWKIKAS YLGEQALEAF FAKGR
|
| |