| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Gmet_2408 |
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| Symbol | |
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| ID | 3740446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Geobacter metallireducens GS-15 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007517 |
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| Strand | - |
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| Start bp | 2722909 |
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| End bp | 2724123 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637779700 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_385358 |
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| Protein GI | 78223611 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0000198894 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 70 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAACG AAGACCTGGG AAAGCTGAAG ATCGACAAGG GCGCCCTTGC CCGTTCGGGA
GGCCGGCGCC GGCCGCGCTT CTGGATTGTG GCAGCTGTGG CGGTGGTTGT GCTCCTGATC
CTCTTCGTGA GCGGCGTCCT TTCGCCGGCG GTAACCGTGG AAACGGGCAC CGTGACCCAG
GTCTACCCTT CCCAGGCCTA CACACTCCTG AACGCCAGCG GTTATGTGGT GGCCCAGCGC
AAGGCCGCCG TGGCCGCCAA GGTGACCGGT CGGCTTGACT GGCTGGGAGT GGAGGAGGGG
AGCCGCGTGA AACAGGGCGA AATCCTCGCC CGCCTGGAAA ACCTCGATGC CGCGGCAGCC
AGGGATCAGG CCGCCGCCAC CGTGAAAACT TCCCGGGCGA GCCTCGACCA GGCCAAGGCC
GAGCTCACCG ATGCTACCCT GGCCTTTGAG CGGGAGAAAC AACTCCTGAA GGAGGGGATT
GTCGCCAAGG CCGAGTACGA TTCCGCCGAG GCCCGCTACC GCCGGGCAAA GGCGGCAGTG
ACCGGGGCCA GTGCCTCCAT CGTCGCTTCC GAGGCGGCCC TCAGGGGTGC CCAGGTGAAT
CTGGAATACT CCTTCATCCG TGCCCCCTTC GACGCCGTGG TCCTTACCAA GAACGCCGAT
ATCGGCGATA TCGTCACCCC CATCGGCGCC GCGGCCAACG CCAAGGCCGC GGTGGTCACC
ATTGCCGACC TCGGCTCCCT CCAGGTGGAG GCCGATGTCT CCGAATCGAA CCTGGAGACG
GTAAAGGTCG GGCAACCGTG CGAGATACAG CTGGATGCCC TTCCCGAAGT GCGCTTTAAG
GGGAGGGTCC ACATGGTGGT CCCCACCGCC GACCGCTCCA AGGCGACAGT GCTCGTGAAG
GTCCGCTTCG AGAAGCTCGA CCCGCGGATA CTGCCGGAGA TGAGCGCCAA GGTGGCTTTT
CTGGAGCATC TCGTGGCGCC GGGCGAGGAA AAGCCCAAGA CGGCGGTGAA CCCCGCTGCG
GTAGTGGAGC GGGGAGGGCG GAAGGTGCTC TTTCTCGTGA AGGGTGGCCG GGTGGCGGAA
ACGCCAGTCA CCGTGGGCGC GAAGATCGGC GAGATGCTGG AGATAACCGC CGGCGCCAAG
CCGGGCGACA AGATCGCCCT CAAGCCCCTG GATAAGCTCA AGGACGGGAC GAAGATCAAG
ACGGCGGAGA AGTAG
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| Protein sequence | MANEDLGKLK IDKGALARSG GRRRPRFWIV AAVAVVVLLI LFVSGVLSPA VTVETGTVTQ
VYPSQAYTLL NASGYVVAQR KAAVAAKVTG RLDWLGVEEG SRVKQGEILA RLENLDAAAA
RDQAAATVKT SRASLDQAKA ELTDATLAFE REKQLLKEGI VAKAEYDSAE ARYRRAKAAV
TGASASIVAS EAALRGAQVN LEYSFIRAPF DAVVLTKNAD IGDIVTPIGA AANAKAAVVT
IADLGSLQVE ADVSESNLET VKVGQPCEIQ LDALPEVRFK GRVHMVVPTA DRSKATVLVK
VRFEKLDPRI LPEMSAKVAF LEHLVAPGEE KPKTAVNPAA VVERGGRKVL FLVKGGRVAE
TPVTVGAKIG EMLEITAGAK PGDKIALKPL DKLKDGTKIK TAEK
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