Gene Gmet_2180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagGmet_2180 
Symbol 
ID3739972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameGeobacter metallireducens GS-15 
KingdomBacteria 
Replicon accessionNC_007517 
Strand
Start bp2465102 
End bp2465731 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content36% 
IMG OID637779474 
Producthypothetical protein 
Protein accessionYP_385134 
Protein GI78223387 
COG category[S] Function unknown 
COG ID[COG4627] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value0.810913 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.000154627 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGTTGCTAT ATTTTGATCT AAAAGGCCTG ATTATGCACG ATAAAACCGG TGTCATGAAA 
ACGATTAACA AAAAGCCTTC GGTAATCATA GAATGCGGCT GTGGTGAGTC CAAACGAATG
GCTGATTCGA TCGCTATTGA TATTATCAAC ATGGATGGAG TTGATATTGT GGCAGACCTT
AATAAAGGTT TCCCTTTTTT TGATGATAAC AGTGTTGACG GAATCGTTTC ACATCATTTT
CTGGAACACC TTACTAGTAT TGATCTGTTC TTTAAGGAAT CATACAGGAT ACTTAAAAAG
GGCGGAAAAT TTAGTGGAAC CGTACCACAT TTTTCTAATC CGTATTTCTA TAGTGATTAC
ACTCATAAGA CTCAGTTTGG CCTGTATTCG TTTTCCTATC TTTCAAAAAA GCAATTTTTC
AAGCGGACTG TTCCAGTTTT TTACAATGAT TTGGATTTCG AAATTATTAA GTTGGAAATA
GTATTTTATT CGATCTTTAA CTCGCGAAAG TTCCCCAAGA GGATCGTGCA GAAAATTGTA
AATCGCTCAA AATGGACCCA GGAATTTTAT GAAGAGTGTT TCTGCTTTAT GTTTCCGGCA
TTCGAAATCA AGTTTGAGTT GCAAAAATAG
 
Protein sequence
MLLYFDLKGL IMHDKTGVMK TINKKPSVII ECGCGESKRM ADSIAIDIIN MDGVDIVADL 
NKGFPFFDDN SVDGIVSHHF LEHLTSIDLF FKESYRILKK GGKFSGTVPH FSNPYFYSDY
THKTQFGLYS FSYLSKKQFF KRTVPVFYND LDFEIIKLEI VFYSIFNSRK FPKRIVQKIV
NRSKWTQEFY EECFCFMFPA FEIKFELQK